Pairwise Alignments

Query, 1117 a.a., Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) from Variovorax sp. SCN45

Subject, 1033 a.a., error-prone DNA polymerase from Pseudomonas putida KT2440

 Score =  922 bits (2382), Expect = 0.0
 Identities = 529/1090 (48%), Positives = 695/1090 (63%), Gaps = 66/1090 (6%)

Query: 30   LTLPDYAELHCLTNFSFQRGASTPEEMVERAYQLGYKALAITDECSVAGIVRAHVCLRGM 89
            +  P YAELHCL+NFSFQRGAS+ +E+  RA + GY+ALAITDEC++AGIVRA    +  
Sbjct: 8    MNTPGYAELHCLSNFSFQRGASSADELFRRAREQGYQALAITDECTLAGIVRAWQAAK-- 65

Query: 90   EHKLDEYEREHPDEPKIPRNPTFRLLFGSEFQF-ERFRLVVIANDTEGWGNLCEFITAAR 148
             H+L                   RL+ GSE Q  +  +LV++  +  G+ NLC  IT AR
Sbjct: 66   VHQL-------------------RLIVGSEVQLCDGPKLVLLVENLTGYQNLCALITRAR 106

Query: 149  NTELPKGEYRVGWEESDVASLQHCQILFVPNRNPGGAMDKATLHEDLLAARALYGENLWL 208
                 KG Y++     D   L H  +L +      G  D AT        R+++ E LWL
Sbjct: 107  R-RAEKGAYQLF---RDDLLLHHQGLLALWVAADSG--DTATG----AWLRSVFAERLWL 156

Query: 209  AVELFNELDDDLWLVTLMEVGEQAGVPLVAAGDVHMHARSCKPLHDVLTAVREGKTVAEC 268
            AV L    DD + L  L  +    G+  VA GDVHMH R  + L D +TA+R+   V+E 
Sbjct: 157  AVHLHRGSDDAVRLQRLRALAADVGIRAVACGDVHMHVRGRRALQDCMTAIRQHCQVSEA 216

Query: 269  GFALQSNAQRHLRPRMRLAEIHLRRMLENTLAVAGRCNFDPEVIRENYKYPLETLGSDET 328
            G  L +N +RHLR + +LAE++   +L  TL +A RC FD   +  NY+YP E +    T
Sbjct: 217  GRFLFANGERHLRSQAQLAELYPLDLLAETLVIARRCQFDLSEL--NYQYPRELVPEGHT 274

Query: 329  PAQTLVRKTWEGARGRYPEGIPDKVRAQVQKELDIIIDLKYEMFFLTVENIVSFARSQKI 388
            PA  L     +G   R+P+G   KVR  + KEL +I +L YE +FLTV +IV+FARSQ+I
Sbjct: 275  PASWLRELCEQGMPLRWPDGPSGKVRDVLAKELGLIEELGYESYFLTVHDIVAFARSQRI 334

Query: 389  LCQGRGSSANSAVCFCLGITAIDPTKGHLLFERFLSRERHEPPDIDVDFEHQRREEVIQY 448
            LCQGRGS+ANS VCF LGIT +DP K HLLFERFLSRER+EPPDIDVDFEH RREEVIQY
Sbjct: 335  LCQGRGSAANSVVCFVLGITELDPMKHHLLFERFLSRERNEPPDIDVDFEHDRREEVIQY 394

Query: 449  IYAKYGRHRAAIAAVVICYRSRSALRDVGKAIGIDERLIDEFAKDHYWFDDTVLGEQLRQ 508
            ++ +YGRHRAA+ AVV  Y +  A+RDV +A+G+    +D  AK    + D +  +Q R 
Sbjct: 395  VFRRYGRHRAALTAVVNTYHAAGAVRDVARALGLPADQVDALAKCCGRWSDRIPDDQ-RL 453

Query: 509  AQARVGVVEDELKLVHWIEMTQKLKGFPRHLSQHVGGFVLTHTRLTRLVPVEKASMKDRS 568
            A+A        L+ V  + +  +L GFPRHLSQH GGFV++   L +LVPVE A+M +R+
Sbjct: 454  AEAGFEAGSPSLRRV--LVLAGELIGFPRHLSQHPGGFVISQQPLDQLVPVENAAMPERT 511

Query: 569  VIQWEKDDLEAMGMLKVDVLALGMLSAIRRGLEHMNRWRGSTIEMHQIPNDDQKVFDMIC 628
            VIQW+KDDL+ +G+LKVDVLALGMLSA+RR  + +   RG  + +  IP++D   + MI 
Sbjct: 512  VIQWDKDDLDMVGLLKVDVLALGMLSALRRCFDQLQHHRGRHLTLATIPSEDPATYAMIS 571

Query: 629  DADTIGVFQIESRAQMSMLPRLKPRTYEDLVIEVAIVRPGPIQGGMVHPYLKQRERVRKG 688
             A+T+GVFQIESRAQM+MLPRL+P+ + DLVIEVAIVRPGPIQG MVHPYL++R    K 
Sbjct: 572  RAETMGVFQIESRAQMAMLPRLRPQKFYDLVIEVAIVRPGPIQGDMVHPYLRRR---LKQ 628

Query: 689  LPIHYEKEELREALERTLGIPIFQEQVMQIAMIAAKFTADEADQLRRAMAAWKRKGGLGK 748
             P+ Y   +L+E  ERTLG+P+FQEQVM++AM+AA +T  EADQLRR+MAAWKR GGL  
Sbjct: 629  EPVTYPSPQLKEVFERTLGVPLFQEQVMELAMVAADYTPGEADQLRRSMAAWKRHGGLEP 688

Query: 749  FHDKLVNGMTLNGYKASFAEAIFKQVMGFGDYGFPESHAASFALLVTVSSWLKNYEPACF 808
              ++LV GM  NGY  +FAE IF+Q+ GFG YGFPESHAASFALL   SSWLK +EPA F
Sbjct: 689  HRERLVQGMLRNGYTLAFAERIFEQIKGFGSYGFPESHAASFALLCYASSWLKCHEPAIF 748

Query: 809  LAALLDSQPMGFYSPSQLVQDARRHGVEVRPVDVTRSDFDTTLEAREPDAPRPSGIDERY 868
              AL++S PMGFYSP QL+Q+ARR G+EVRPVDV  SD+D TL   EPDA          
Sbjct: 749  TCALVNSWPMGFYSPDQLLQEARRQGIEVRPVDVCHSDWDCTL---EPDA---------- 795

Query: 869  ADRLGNENQPAVRLGLNRIAGFSAGGVERLLKARAAAPFTSTEDLALRAELEGKDMAALA 928
                  E   A+R+GL  + G +    +R+ +AR+  P+ + EDL LRA L+ +  A LA
Sbjct: 796  ------EGTLAIRMGLRLVRGLAEADAKRVQQARSQRPWRNVEDLCLRAGLDARARARLA 849

Query: 929  AADALMSLSGHRRQQVWD-ATAQRRAPALLRGVPINEQALLLPAASEGEEIVGDYASLRL 987
               AL +L+  R Q  W  A  Q + P       + E+ + LP  + GE+++ DY +L  
Sbjct: 850  DGGALRALASDRHQARWQVAAVQPQLPLFADVQALPEEPVQLPVPTVGEDLMADYQTLGT 909

Query: 988  TLRRHPLALLRPRLARMKLMSAAELRSVPNGQTARACGIVKGRQRPQTANGTIFVTLEDE 1047
            TL  HPLALLR RL  +   S++EL+ V +G      G+V GRQRPQTA+G  FVTLEDE
Sbjct: 910  TLGPHPLALLRARLRALGCRSSSELQGVEHGDNIAVAGLVVGRQRPQTASGVTFVTLEDE 969

Query: 1048 TGNVNVIVWSHVIEAWREPLLKSHLLAVQGTWQRDDETGGKVQHLVATGFKDLTPLMGRL 1107
             G VNV+VW  + E  R  L+ S LL V G  ++++     V+HL+A   +D++PL+  L
Sbjct: 970  HGMVNVVVWRALAERQRRALVGSQLLKVSGRLEQEN----GVRHLIARRLEDVSPLLQGL 1025

Query: 1108 AQSNTSRDFH 1117
                 SRDFH
Sbjct: 1026 --DVRSRDFH 1033