Pairwise Alignments

Query, 296 a.a., ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 290 a.a., sugar ABC transporter permease from Dickeya dadantii 3937

 Score = 92.8 bits (229), Expect = 8e-24
 Identities = 71/271 (26%), Positives = 134/271 (49%), Gaps = 24/271 (8%)

Query: 29  WQFWGAVMVVPYLLVFVVFVLYPVGYGLW-------LARHPQSYV------KLVEDPIFF 75
           W  W  V++ P LL  ++F  +P+   ++       +A    S+V      +L+ D +F+
Sbjct: 5   WLPW--VILSPSLLFLLLFTYFPLLRSVYDSLFDTRMAGAGASFVGLGNVARLLNDAVFW 62

Query: 76  RSVINTVVFLIVAINVKMLVALVLSGFF----VISRWWIKIVAAIFILPWAMPSIPTILS 131
           R+++N +V++++ +   +++AL+L+        ++RW    +   F  P  +P +     
Sbjct: 63  RALLNNLVYILLTVIPGVVLALLLAVALWENHAVNRW----LRTAFFFPMIIPMVSAAAL 118

Query: 132 FRFMLNPEWGVINTTIFRLTGADGPNWLNDPTLALGFAMVVHIWKSLPFWTLILVAGRLA 191
           + F+  P  G+++  + +L G    N+L     AL    ++ +WK   ++ L  +AG  +
Sbjct: 119 WLFIFMPGIGLLDYYLAKLFGPMNNNYLGRSNSALLALALIGVWKFAGYYMLFFLAGLQS 178

Query: 192 IPGEQYEAASVDGASSWQKFRFVSWPALKTLYITSLILSMIWTLGDFNSVYLLTGGGPAD 251
           IP    EAA ++GASS Q F  V+ P L+      +  ++I+++   + V ++T GGP +
Sbjct: 179 IPPSTREAAIMEGASSTQVFFRVTLPLLRPTLSFVITTALIYSITQIDHVAVMTHGGPDN 238

Query: 252 LTHVLATLGIRYLRLDQVDLSMASIVVALPL 282
            T VL    I+ L  D  DL  AS    L L
Sbjct: 239 ATTVLLYY-IQNLAWDTHDLGKASAATFLTL 268