Pairwise Alignments

Query, 434 a.a., Putative diheme cytochrome c-553 from Variovorax sp. SCN45

Subject, 1187 a.a., nicotinate dehydrogenase subunit B (EC 1.17.2.1) (from data) from Pseudomonas putida KT2440

 Score =  245 bits (625), Expect = 6e-69
 Identities = 147/378 (38%), Positives = 204/378 (53%), Gaps = 20/378 (5%)

Query: 42   AALLVRGEYLTKAADCIACHTVPGKGEPFAGGLPFVLPFGTIYSSNITADPATGIGNWSD 101
            AA+L RG  +  A DC  CHTV G G+  AGGL    PFGT+YS+NIT DP TGIG WS 
Sbjct: 803  AAMLERGRQVAAAGDCAVCHTVSG-GKANAGGLAMDTPFGTLYSTNITPDPETGIGRWSF 861

Query: 102  EQFVRAVHDGVRADGQRLYPAFPYTAYTALSRKDVLAIKAYLFSLPQVKQPNREADLGFP 161
              F RA+ +G+  DG+ LYPAFPYT++  ++  D+ A+ AYL S   V+Q      + FP
Sbjct: 862  AAFERAMREGISRDGRHLYPAFPYTSFRNINDADMQALYAYLMSQTPVRQEAPANQMRFP 921

Query: 162  FNQRWAMGFWNAAFFKSRRFEADPSQPPAWNQGKYLATALGHCAECHTPRNFAFALE-TS 220
            FNQR  M  WNA F +   ++ DP +   WN+G YL   LGHC  CH+PRN   A +  S
Sbjct: 922  FNQRPLMAGWNARFLQRGEYQPDPQRSAQWNRGAYLVDGLGHCTACHSPRNLMGAEKGGS 981

Query: 221  NNLAGESVQGWRAYNITSDVKNGIGAWSDAEIAAYLTTGHADGRGSASGPMGEAVEHSLQ 280
            + LAG  V GW A  + +  K+    WS+ E+  YL+TG ++  G A+GPMG  V   L 
Sbjct: 982  SYLAGGMVDGWEAPALNALGKSST-PWSEDELFNYLSTGFSEKHGVAAGPMGPVVS-ELA 1039

Query: 281  HLKAEDTAALVSYLRTVPAKAGKEPIEIDAKAPWAVAASAAAPAANTAEGHEQGLRLFAA 340
             L   D  A+  YL ++  +            P A+AA+ AAP  +T      G R+F  
Sbjct: 1040 TLPKSDVRAIAHYLSSLEGE------------PQALAAN-AAPQVDTHVSLSNGERVFKG 1086

Query: 341  ACASCHQWNGQGQQT--NYASLLGTRGVNDPGGMNVTQMILRGVKMRVRDNEVYMPAFDK 398
            AC  CH  +G G +      S+     V+     N+ +++L G+      +  YMP F  
Sbjct: 1087 ACLGCHS-DGLGPKLFGVSPSMAVNSNVHSDLPDNLLRVVLHGIPTPATRDLGYMPGFKD 1145

Query: 399  AYTDTEVAALANYVIAQF 416
            + +D +VA LA Y+  +F
Sbjct: 1146 SLSDRQVADLAAYLRHRF 1163