Pairwise Alignments

Query, 318 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 318 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 83.6 bits (205), Expect = 6e-21
 Identities = 81/314 (25%), Positives = 132/314 (42%), Gaps = 13/314 (4%)

Query: 7   LSTDQIPPKERGPLWCEWVWRHFGGLGSDLYDDSEFDGHLA--ASHAGDVILTRLEANRH 64
           LST   P  ER   W E +   +  L  +      FDGHL   ++ +  + L+RL +++ 
Sbjct: 5   LSTHGWPQPERQVRWAEAISDTYFPLSLEFAAGQPFDGHLQRWSTPSTPLSLSRLRSSQL 64

Query: 65  RVLRTTQMARLSEAPYLKIVAPWQGSAEVTQRGRAAAVRSGGWTLYDTTADYTVANPERS 124
              R+          +  +  P        Q G   +   GG+ +    A Y      ++
Sbjct: 65  GYSRSKAHIGQDHEAFYLVTVPHGSEVHFEQDGHQISCSPGGFIVERGDAPYRFHYGTQN 124

Query: 125 DHLIVMLPKDQLASPALPLNDLVARRIGGASGISRVALETMRSTYLELPFMSEAAARGAG 184
           D  ++ LP+  L +  L              G+ R+ +E +          S  AAR   
Sbjct: 125 DLWVLKLPERALKANLLGHKRYTRHCFDARQGLGRIFVEQLDLCARHFD-TSPPAAR--- 180

Query: 185 ELLIQLVRLSLMELAGQETPLTQREALK------DRIRHHVAQNLHDPALSIDSMALALR 238
            LL++    +L+    Q+  +   E          R+  +V QNL DP LS  ++A A  
Sbjct: 181 HLLLEQASATLLLALQQDERVLGSEGSNLSTLHLTRVEQYVQQNLGDPELSPQTIAGACG 240

Query: 239 CSKRLLHSAFAGDDETLNGYIQHQRLAASIRDLLEPANAARSITDIALASGFSNLSHFSR 298
            S R LH  FA    TLN +++ QRL A  R L +P +   +I ++A   GF++ + F+R
Sbjct: 241 LSLRYLHKLFAITPYTLNEWVRLQRLEAVHRQLRDP-HCHLAIGELAFRWGFADQAQFTR 299

Query: 299 VFREHTGGSPSEFR 312
            FR+  G + SE R
Sbjct: 300 AFRQQYGCTASEVR 313