Pairwise Alignments

Query, 400 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 401 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 76/314 (24%), Positives = 132/314 (42%), Gaps = 11/314 (3%)

Query: 63  LWAEQVNAAGGLSVKGTKRPIELIGYDDRSETETCVRTFEKLMGSDKVDLVLPPWGSGAN 122
           L  +++NA GG++ K     IELI  DD +     VR  E+L+  +K+D++   + S   
Sbjct: 53  LAVDEINAKGGINGK----KIELISRDDNANPGDAVRVAEELISREKIDVLAGAFLSNTG 108

Query: 123 FAVAPLANRFGYPLLAPTALSRKLI-DMRLPFFFSLLQQPDKMMGALVDMLVSQNVKTIT 181
            A+A  A +  +  LA   L+ K++      + + L       +  LV        K   
Sbjct: 109 LALADFAKQKKFFYLAAEPLTDKIVWSNGNKYTYRLRPSTYMQVAMLVPEAAKLKKKRWA 168

Query: 182 IVYMDDLFGLENFAALNNALK--KTSIQVLDRKSYPLGVKDLAPVLRTMKDLNPDAFIGI 239
           +VY +  +G  + A     LK  +  ++ +  ++ PLG  D   V++ + D  PDA   +
Sbjct: 169 VVYPNYEYGQSSVATFKTLLKAAQPDVEFVAEQAPPLGKVDSGSVVQALADAKPDAIFNV 228

Query: 240 TYPPDTILASRQAREVGFNPKYFYASVGTAFQLYKNVM--AANTEGVIGMGSWNGKTSPE 297
            +  D     R+    G        SV T    Y + +   A    ++    W G  +PE
Sbjct: 229 LFGADLSKFVREGNTRGLFKDREVVSVLTGEPEYLDPLKDEAPNGWIVTGYPWYGVKTPE 288

Query: 298 AKAYFDAHTKKFGKEPDRWASGHAWAGLQILQQAVEKV-GLDRKALREQIAKNEFKTILG 356
            KA+ DA+  KF K+  R  S   ++ +  +   ++K  G D + L       +  T  G
Sbjct: 289 HKAFLDAYQAKF-KDYPRLGSVVGYSAIHSIVAGIQKAGGTDTEKLVAAFKGLQVDTPFG 347

Query: 357 PIRFEGSENASIPG 370
            I +   +N S  G
Sbjct: 348 KINYRAQDNQSTMG 361