Pairwise Alignments

Query, 400 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 60.8 bits (146), Expect = 6e-14
 Identities = 86/374 (22%), Positives = 153/374 (40%), Gaps = 36/374 (9%)

Query: 14  ATALGAAAVAPQLFAQGSSSGGPVKIGYAIARTGPWAA-------GAQVSQEPNYLLWAE 66
           ATALG ++               VKIG A   TG  AA       GAQ +        A+
Sbjct: 16  ATALGVSSYVQ----------ADVKIGVAGPMTGANAAFGEQYMKGAQAA--------AD 57

Query: 67  QVNAAGGLSVKGTKRPIELIGYDDRSETETCVRTFEKLMGSDKVDLVLPPWGSGANFAVA 126
           ++NAAGG  V G K  I L+  DD  E +  V    +L+  DKV  V+  + S      +
Sbjct: 58  KINAAGG--VNGEK--IVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPAS 113

Query: 127 PLANRFGYPLLAPTALSRKLIDMRLPFFFSLLQQPDKMMGALVDMLVS-QNVKTITIVYM 185
            + +  G   + P + + ++ +  L   F +  + D+      D +V     K + +++ 
Sbjct: 114 EVYDEAGVIAITPGSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHD 173

Query: 186 DDLFGLENFAALNNALKKTSIQVLDRKSYPLGVKDLAPVLRTMKDLNPDAFIGITYPPDT 245
            D +G     A    L+K  ++ +  +    G KD + V+  ++    D        P+ 
Sbjct: 174 KDTYGQGLADATKAQLEKRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEA 233

Query: 246 ILASRQAREVGFNPKYFYASVGTAFQLYKNVM--AANTEGVIGMGSWNGKTSPEAKAYFD 303
               RQ RE G     F +  G       +    A   +GV      + +  P++KA  +
Sbjct: 234 GPLVRQLREQGLKDVKFMSDDGIVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSKAVVE 293

Query: 304 AHTKKFGKEPDRWASGHAWAGLQILQQAVEKVGLDR-KALREQIAKNEFKTILGPIRFEG 362
              +K G EP+ +   +A+A LQ L  A      ++ +   + +  N  +T++G  +++ 
Sbjct: 294 -EFRKAGTEPEGYTL-YAYASLQALAAAFNGAKSNKGEDAAKWLKANPVQTVMGEKKWDS 351

Query: 363 SENASIPG-TVSQW 375
             + ++    V QW
Sbjct: 352 KGDLTVSDYVVYQW 365