Pairwise Alignments

Query, 400 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 85/353 (24%), Positives = 143/353 (40%), Gaps = 25/353 (7%)

Query: 16  ALGAAAVAPQLFAQGSSSGGPVKIGYAIARTGPWAAGAQVSQEPNYLLWAEQ----VNAA 71
           A+  A VA   FA  +     +KIG A  +TGP      +       + A+Q    +NAA
Sbjct: 10  AMVLAGVASHSFAADT-----IKIGIAGPKTGPVTQYGDMQ-----FIGAKQAIKDINAA 59

Query: 72  GGLSVKGTKRPIELIGYDDRSETETCVRTFEKLMGSDKVDLVLPPWGSGANFAVAPLANR 131
           GG+  K     +E   YDD  + +  V    K++ +D V  V+    S +    + +   
Sbjct: 60  GGVDGK----MLEAKEYDDACDPKQAVAVANKVV-NDGVKFVVGHLCSSSTQPASDIYED 114

Query: 132 FGYPLLAPTALSRKLIDMRLPFFFSLLQQPDKMMGALVDMLVSQNVKTITIVYMDDL--F 189
            G  ++ P A S ++        F  +   D   G      ++ +VK   +  + D   +
Sbjct: 115 EGVIMITPAATSPEITARGYKLIFRTIGL-DSAQGPAAGNYIADHVKPKVVAVLHDKQQY 173

Query: 190 GLENFAALNNALKKTSIQVLDRKSYPLGVKDLAPVLRTMKDLNPDAFIGITYPPDTILAS 249
           G     A+   L+    +V   +    G KD + +++ +K  N D      Y P+  L  
Sbjct: 174 GEGIATAVKQTLESKGTKVAVFEGLNAGDKDFSSIIQKLKQNNVDFVYYGGYHPELGLIL 233

Query: 250 RQAREVGFNPKYFYASVGTAFQLYKNVMAANTEGVIGMGSWNGKTSPEAKAYFDAHTKKF 309
           RQA+E G   K F    G        +    +EG++     +    P  K   DA  K  
Sbjct: 234 RQAQEKGLKAK-FMGPEGVGNDSISQIAQNASEGLLVTLPKSFDADPANKKIVDA-IKAD 291

Query: 310 GKEPDRWASGHAWAGLQILQQAVEKVGL-DRKALREQIAKNEFKTILGPIRFE 361
           GK+P       A++ ++++ Q ++K G  D   + E I K  FKT  G + F+
Sbjct: 292 GKDPSGPFVFPAYSAVELIAQGIKKAGSDDTDKVAEAIHKGTFKTPTGDLSFD 344