Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 495 a.a., putative Urea ABC transporter from Pseudomonas putida KT2440

 Score =  145 bits (367), Expect = 1e-39
 Identities = 94/292 (32%), Positives = 154/292 (52%), Gaps = 19/292 (6%)

Query: 13  GLITGGIYALVAIGLNLQYGLMRIMNISHGEFLMLGAFATW--------WAHTALGISPL 64
           GL  G +  L A+GL + +GL+ ++N++HGE LMLGA++T+        +A  A+   PL
Sbjct: 206 GLSLGSVLLLAALGLAITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRFAPGAIEFYPL 265

Query: 65  LFMPVAFALLMALGMTVHWLCFRQVAARAPNVDVFEARSLMVGFGLMFLVQNTALLVWGG 124
           + +PVAFA+   +GM +     R +  R          +L+  +G+  ++     L++G 
Sbjct: 266 IALPVAFAVSAGVGMALERTVIRHLYGRP-------LETLLATWGISLILIQAIRLLFGA 318

Query: 125 ---DLRGYDYLADPVQV-GEMRFTANKLVLFGVALALSLLLIALLKLTLLGKAVRALMQS 180
              ++    +L+  +Q+   +    N+LV+ G ALA+ LL   LL  T LG  VRA+ Q+
Sbjct: 319 QNVEVSNPAWLSGGIQLLPNLVLPYNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQN 378

Query: 181 PTGAQLVGINTKRLHPLMFGIGLGLSGVAGALLSMTYEISPSMGEPYTVTALIVITLGGF 240
              A   G++T R+  L FG+G G++G+ G  LS    + P +G+ Y + + +V+ LGG 
Sbjct: 379 RNMAACCGVSTGRVDMLAFGLGSGIAGLGGVALSQVGNVGPDLGQSYIIDSFLVVVLGGV 438

Query: 241 GSIAGSLVGGLLLGVVEALGMYYTSPSLKMLLSYAVFIGVLIWRPNGLFSRK 292
           G +AGSL     LG+   L        L  +L  A+ I  +  RP GLF+ K
Sbjct: 439 GQLAGSLWAAFGLGIANKLLEPQIGAVLGKILILALIILFIQKRPQGLFALK 490