Pairwise Alignments

Query, 299 a.a., Transcriptional regulator of RpiR family in catabolic operon from Variovorax sp. SCN45

Subject, 289 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  143 bits (361), Expect = 4e-39
 Identities = 88/279 (31%), Positives = 143/279 (51%), Gaps = 1/279 (0%)

Query: 4   SLLQKIAQIRSDAPATRRAILDLILEDPDRVLEESFEQLAERSRSSVPTIMRTCRDLGFA 63
           ++L+KI         + R + ++IL  PD  +  S   +A  +  S PT+ R CR +   
Sbjct: 2   NMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDTR 61

Query: 64  GLREFKLALAQELALGGSPLHRRVNIEDAADEVVGKIARSAAASVSGVRGQLDMQVLDGA 123
           G  +FKL LAQ LA G   ++R VN +D+ +   GKI  SA A++  VR  LD   ++ A
Sbjct: 62  GFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKSAINRA 121

Query: 124 VAAIAAAPHVDLYGAGATSWFMANDLQARLFRLGLSANAWADYHLQQVAGAAQRPGGVVI 183
           V  +  A  +  +G G+++  +A+D   + FR  +      D  LQ+++      G VV+
Sbjct: 122 VDLLTQAKKIAFFGLGSSA-AVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVV 180

Query: 184 AISHVGGMPSLLDAVDIARGQGAKVVALTRPGTALAAKADFLLGLSVPDDAVMHVGIDAY 243
            ISH G   +L++   +AR   A V+ALT  GT LA +A   + L VP+D  +++ + + 
Sbjct: 181 LISHTGRTKNLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSR 240

Query: 244 LTHLTAIEILTVLVAQRRGEPAVQRLQRARDAFQRHGID 282
           L  LT I++L      RRG      L+R ++A +    D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFD 279