Pairwise Alignments

Query, 325 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

 Score =  274 bits (700), Expect = 2e-78
 Identities = 135/293 (46%), Positives = 201/293 (68%), Gaps = 5/293 (1%)

Query: 24  VRAVDDVSFAIQPGETLGLVGESGSGKSTIGRTVLRLLERTSGQVLYRGDDIGALSGERM 83
           VRA++ VSF ++ G+TL +VGESG GKST+ R +  + E +SG +   G ++   S    
Sbjct: 27  VRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLIEEPSSGSLQIAGTEVKGASKAER 86

Query: 84  RKLRSKLQIIFQDPYASLNPKMRISAILGEALSTHGLHKGAAARDKRIAELLETVGLRAE 143
           ++LR  +Q++FQ PYASLNP+ +I   L E L  +     A  RDK + +++E VGLR E
Sbjct: 87  KQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLINTSLSKAERRDK-VQKMMEQVGLRPE 145

Query: 144 HASRFPHEFSGGQRQRIGVARALAVEPEFIVADEPLSALDVSIQSQVINLLADLRERLGL 203
           H  R+PH FSGGQRQRI +ARA+ ++P+ +VADEP SALDVSIQ+QV+NL  DL++    
Sbjct: 146 HYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTSALDVSIQAQVLNLFMDLQKEFNT 205

Query: 204 TMLFISHDLDVVEYLCDRVVVLYLGKVMEVATTDELFARPSHPYTRALLAASPKPDPEVA 263
             +FISH+L VV ++ D+V+V+YLG+  E+   ++++A+P HPYT+ALL+A+P   P+  
Sbjct: 206 AYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKEDIYAKPLHPYTQALLSATPAIHPDPL 265

Query: 264 TERIALKGDIPSPISPPSGCVFRTRCPHAIEACAQTVPPLEEIS----AGHYS 312
             +I + G++P+P++PP GC F  RCP+A E CA+ VP L ++S    A HY+
Sbjct: 266 KPKIRIVGELPNPLNPPDGCAFHKRCPYATERCAKEVPALRQVSTRQVACHYA 318