Pairwise Alignments

Query, 317 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

 Score =  246 bits (629), Expect = 4e-70
 Identities = 130/313 (41%), Positives = 187/313 (59%)

Query: 5   LFRYIASRAAGMLVVLAIVAVLVFVLTRAASGDPVSVLLGDQATAADIARVQKEYGLDKP 64
           + R+I  + A  +  L +++V+VF L R   GDP  ++LGD A    +A ++   GLD  
Sbjct: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDMADPQSLADMRHTLGLDHS 60

Query: 65  LPVQFGYWLREVLQGNLGTSIFLQRPVTQALWERSEPTTLLALMAVAIAALIGVPCGIVS 124
           L  QF  W + VL  +LG SI  ++ V   + +R   +  + L+AV  A LI VP G+++
Sbjct: 61  LVTQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLIA 120

Query: 125 AVFRGRVVDQLFTGIAMLGASIPSFWLGIVLIQIFAVSFGWFPVSGYGAPDAPFAERLHS 184
           A  +   +D     IA L  SIPSFWLG++L+  F +  GW PV GY +      + +  
Sbjct: 121 AWKQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSFSQAPWQAMSY 180

Query: 185 LVLPATVLGLLNSALIIRFTRASMLDVLGEDYVRTARSKGLSESVVVLKHALRNALVPIV 244
           +VLP   L L+    I R  RAS ++VL  +Y+  AR+KGLSE  V+ KHAL NA  P  
Sbjct: 181 MVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFAPTW 240

Query: 245 TVIGLTVALMIGGAVITETVFGLPGVGNLVVSAVLRRDYPVIQGALLVIAAIYVLINFSI 304
           T++GL +  ++GG  + ETVF LPG+G L+V A+  RDYPV+QG LL+I  IYVL+N  +
Sbjct: 241 TLVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVNLCV 300

Query: 305 DLLYAVVDPRVKV 317
           DLLY + DPRVK+
Sbjct: 301 DLLYPLFDPRVKL 313