Pairwise Alignments

Query, 317 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 305 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  233 bits (595), Expect = 3e-66
 Identities = 122/312 (39%), Positives = 189/312 (60%), Gaps = 9/312 (2%)

Query: 5   LFRYIASRAAGMLVVLAIVAVLVFVLTRAASGDPVSVLLGDQATAADIARVQKEYGLDKP 64
           + +Y+  R    L VL  VA + F L    SGD  + + G  ATA  IA+++ + GLDKP
Sbjct: 1   MVKYVFQRLLVALAVLFTVAAVSFSLLHL-SGDLATAIAGPDATAETIAQIRVQNGLDKP 59

Query: 65  LPVQFGYWLREVLQGNLGTSIFLQRPVTQALWERSEPTTLLALMAVAIAALIGVPCGIVS 124
           L  QF  W+   LQ + G S + +  V + + +R   T  L  +++ +A  + +P G+++
Sbjct: 60  LLSQFSRWMWSALQLDFGRSFYFENTVMELVGQRMPVTLKLGGVSLLLALTVAIPLGVLA 119

Query: 125 AVFRGRVVDQLFTGIAMLGASIPSFWLGIVLIQIFAVSFGWFPVSGYGAPDAPFAERLHS 184
           AVFR   VD+    ++++G ++P+FW  +VLI IFAV   W PV+G G+           
Sbjct: 120 AVFRDTWVDRFAMLVSVVGQAMPNFWFALVLILIFAVGLKWLPVAGNGS--------WQH 171

Query: 185 LVLPATVLGLLNSALIIRFTRASMLDVLGEDYVRTARSKGLSESVVVLKHALRNALVPIV 244
            VLPA  LG      ++R TR+ MLDVLG DY+RTAR+KGLS   VV+KH LRNA++P+V
Sbjct: 172 FVLPAVALGYYAMPSLMRLTRSGMLDVLGSDYIRTARAKGLSAFKVVVKHGLRNAIIPVV 231

Query: 245 TVIGLTVALMIGGAVITETVFGLPGVGNLVVSAVLRRDYPVIQGALLVIAAIYVLINFSI 304
            +  + +  M+GG+V+ E+VF L G+G L   ++ R D+PV+Q  +L+IA  Y+ + F  
Sbjct: 232 ALATVELGFMLGGSVVIESVFSLQGLGQLAWDSIARNDFPVVQAIVLIIAVFYIGLTFLA 291

Query: 305 DLLYAVVDPRVK 316
           D+L A++DPR++
Sbjct: 292 DVLNALLDPRLR 303