Pairwise Alignments

Query, 526 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 518 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  167 bits (422), Expect = 1e-45
 Identities = 130/492 (26%), Positives = 232/492 (47%), Gaps = 26/492 (5%)

Query: 29  LCAALPQQQAHAQGPRNFATLAMVAEPQTLDPMASTADLVGTIMQHVYETLYTFDAKWNV 88
           LC  L      AQ       + + A+ ++ +P  +  +   T+M H+ E L       +V
Sbjct: 9   LCVTLALGAGLAQA-ETALRVGLNADIRSTEPGVNRDENTDTVMLHIVEGLVAHREDASV 67

Query: 89  VPMLAEGMPKISADGKTYAIALRKGVMLHNGRELNADDVVASLQRWMDQSPRGKAV---- 144
            P+LA  + K S DG TY   LR  V   NG  L A DV  + +R+++   + + +    
Sbjct: 68  GPLLAREV-KRSDDGMTYTFTLRDRVHFQNGATLTAQDVKWTWERYLNPKTQWRCLAEFD 126

Query: 145 ---GKEIDSLKAKGPLAVEIVLKEPYAPLLSQLALPS-GMAAIMAKDSIASP--LKDFVG 198
              G +I  +    PL V   L +P    L+ +A P  G + I+  DS+A+    K  +G
Sbjct: 127 GRGGAKITGIDTPDPLTVVFHLDQPSGLFLASMARPDCGGSGILHPDSLAADGSWKAPIG 186

Query: 199 TGPYKFKERRPDQFVLLTRFDKYSARKEAA-SGYGGKREAAIEELRFVPVPNASTRVEGA 257
           TGP+   E +P Q+V+L+RF  YS R +A   G+ GK+ A ++ +RF+ +P+ S+     
Sbjct: 187 TGPFSLGEWKPGQYVVLSRFKDYSPRDDAGPDGFTGKKTALVDAVRFMVIPDPSSAKAAL 246

Query: 258 LAGQYDFADLLPVEALPRLEKSGGKTVPIMTPSFGFPYLVLNTKEGVAASQPVRQAIQTA 317
           ++   D    +       L+ + G  +   +P      L+  T + +     +RQAI  +
Sbjct: 247 MSNNIDLLPNVSASDAQELKSTPGVQISF-SPIMAICGLLFQTNDPLLKDVRIRQAIAHS 305

Query: 318 LGEGEMLAAGFGDTRFFVAEANH--FPKGSPFYSTAGADQYNQRNAAKAKEAAAKAGYKG 375
           L  G+M+ A    T    +E N+   P+ SPFYS A A Q  + +  +A+    +AGY G
Sbjct: 306 LDYGQMVTALSNGT----SEPNNSAIPQTSPFYS-ATAKQGYRYDPQEAQRLLKEAGYHG 360

Query: 376 EPIRVLTSRQYDFHYNMALLMAEQLKRAGFKVDLNVVDWATLVQRRNDPKLWDVYVTHSG 435
           +PI+++ +++Y   ++M LL       +G  + +  ++W T ++R        +  ++S 
Sbjct: 361 QPIKMIVNKRYSQMFDMGLLSQAMAVASGLNIQMETLEWGTQLERYQSGNYQMMAFSYSS 420

Query: 436 QFPEPMLSPPQLGDGAP---GWWETPAKKSALQAFNVESDPAKRGALWGKVQQVVYDEVP 492
           +          +GD        W+ P  ++ L+    ESD AKR AL+ ++  ++  + P
Sbjct: 421 RLDPATSFDSLMGDKTKEPRKVWDNPQAQAVLRDAVRESDTAKRQALFDQLHTMMIHDTP 480

Query: 493 YINVGKFNGLSA 504
            + +  +NG  A
Sbjct: 481 MVII--YNGTVA 490