Pairwise Alignments

Query, 526 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 504 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  107 bits (266), Expect = 1e-27
 Identities = 124/498 (24%), Positives = 218/498 (43%), Gaps = 42/498 (8%)

Query: 14  KLSKRSLLGASLLAMLCAALPQQQAHAQGPRNFATLAMVAEPQTLDPMASTADLVGTIMQ 73
           K+ KR++  A +L  L  +L  + A A G     T+    +  T DP+ S  +    +  
Sbjct: 2   KMYKRNVAAAGVL--LALSLVSELAQAAG---ILTIGRREDSTTFDPIKSAQNADNWVFS 56

Query: 74  HVYETLYTFDAKWNVV-PMLAEGMPKISADGKTYAIALRKGVMLHNGRELNADDVVASLQ 132
           +V++ L   D     + P LA+    +S DGK Y   LR+     +G  + A D V SL 
Sbjct: 57  NVFDVLIRVDKTGTTLEPGLAQHWT-VSPDGKVYTFTLREA-RFSDGSPVTAQDAVFSLS 114

Query: 133 RWMDQSPR-GKAVGKEIDSLKAKGPLAVEIVLKEPYAPLLSQLALPSGMAAIMAKDSIAS 191
           R  D      +     ID+L A     + + LK P AP LSQLALP+   A +  ++I  
Sbjct: 115 RIRDSKESLWRDSYSIIDTLAAPDAHTLVVTLKSPSAPFLSQLALPN---ASVLPENIVH 171

Query: 192 PLKDF------VGTGPYKFKERRPDQFVLLTRFDKYSARKEAASGYGGKREAAIEELRFV 245
            L +       VG+G +  +       ++LT+ + Y         Y      +++ + + 
Sbjct: 172 RLGEETFAEKPVGSGAFVIQSWARGDKIVLTK-NPY---------YWQADHVSLDGVEWQ 221

Query: 246 PVPNASTRVEGALAGQYDFADLLPVEALPRLEKSGGKTVPIMTPSFGFPYLVLNTKEGVA 305
            +P+ +TR+    AG+ D A  +P   L  L+K     V    PS    +L++N   G+ 
Sbjct: 222 TIPDDNTRMLKVQAGELDAALSVPFSRLASLQKDPNLKV-TQDPSTREDHLLINHAHGLL 280

Query: 306 ASQPVRQAIQTALGEGEMLAAGFGDTRFFVAEANHFPKGSPFYSTAGADQYNQRNAAKAK 365
               VRQA+  A+ +  ++        +     ++ PKG+ ++      +    +  KAK
Sbjct: 281 GKVEVRQALDYAIDKSAIVKT--VTFNYGTVANSYLPKGALYFYADNLQR--PYDPEKAK 336

Query: 366 EAAAKAGYKGEPIRVLTSRQYDFHYNMALLMAEQLKRAGFKVDLNVVD----WATLVQRR 421
           +    AG  G  +  + +   +    +A+L+ +QL +AG  V+L  VD    W+ LV   
Sbjct: 337 QMLKAAGASGLTLNYVVNAGDEVDEQIAVLLQQQLAKAGVAVNLQKVDPSQNWSMLV--A 394

Query: 422 NDPKLWDVYVTHSGQFPEPMLSPPQLGDGAPGW---WETPAKKSALQAFNVESDPAKRGA 478
            D  L   Y T+    P+   +     D    +   ++    K+ + A  VE DP KR  
Sbjct: 395 GDFDLSVNYWTNDILDPDQKTTFVLGHDSNMNYMTRYQNDKVKALVAAARVEMDPKKREQ 454

Query: 479 LWGKVQQVVYDEVPYINV 496
           ++  +Q++  D+V +I++
Sbjct: 455 MYIDLQKMAKDDVNWIDL 472