Pairwise Alignments

Query, 257 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 168 a.a., sigma factor from Sphingobium sp. HT1-2

 Score = 52.8 bits (125), Expect = 5e-12
 Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 6/136 (4%)

Query: 10  FPALRSRLVRAAARMLGGTADAEDVVQDTYLRALEAADKPAPDSAQAWLTTVMQNLAVDR 69
           + A R  LV  AA +LG  A AED+VQD ++      D+    +   +L  +++NLA+D 
Sbjct: 11  YAAQRPALVDYAASILGDRARAEDIVQDAWISFASIEDQNGIQNPDRFLRRMIRNLAIDA 70

Query: 70  LRR----DRWMQWWLKDAE-GLSPQAPSAETEAAQAQEADHALRLLAERLSRTDAAAVLL 124
           LRR    DR     +++AE  +   AP  E      QE     R LA RL      A+ +
Sbjct: 71  LRRTRRYDRIAGGDMEEAERTVQDNAPGTEQALIARQELARVQRALA-RLPERQRLAIEM 129

Query: 125 REVFELSYSEIAKVSG 140
             +      EIA+  G
Sbjct: 130 HRIGRYKLREIAERLG 145