Pairwise Alignments

Query, 257 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 200 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 46.6 bits (109), Expect = 4e-10
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 7/135 (5%)

Query: 31  AEDVVQDTYLRALEAADKPAPDSA---QAWLTTVMQNLAVDRLRRD-RWMQWWLKDAEGL 86
           AED++QD +++A+        +      +W+  +  NLA+D  R++ R     L+D   +
Sbjct: 49  AEDLMQDAFIKAIHTMKGGRYNEEGKFSSWICRIAHNLAIDHFRKEKRSPVITLEDGSNV 108

Query: 87  SPQAPSAE--TEAAQAQEADHA-LRLLAERLSRTDAAAVLLREVFELSYSEIAKVSGKTE 143
                 +E   E+ Q +E  HA LR L + L ++    +++R   ++S+ EIA  +G + 
Sbjct: 109 FNTMSFSEDSAESLQIKEDTHARLRELIQTLPQSQREVLMMRHYADMSFQEIADATGVSI 168

Query: 144 AGCRQQLHRALMRLR 158
                ++  AL+ LR
Sbjct: 169 NTALGRMRYALINLR 183