Pairwise Alignments

Query, 257 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 168 a.a., putative RNA polymerase sigma factor FecI from Azospirillum sp. SherDot2

 Score = 58.9 bits (141), Expect = 6e-14
 Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 4/144 (2%)

Query: 22  ARMLGGTADAEDVVQDTYLRALEAADKPAPDSAQAWLTTVMQNLAVDRLRRDRWMQWWLK 81
           AR LG    AEDVVQDTYLR    A  P  D+ +++L  +  N+A+DRLR +        
Sbjct: 25  ARRLGSLCLAEDVVQDTYLRLRSLAALPEIDNPRSYLFRMADNIALDRLRAETRRGRRFA 84

Query: 82  DAEGLSPQAPSAETEAAQAQEADHALRLLAERLSRTD---AAAVLLREVFELSYSEIAKV 138
            AE L  + P  E +A  A E    L  L+  L+          LL +   LS+++IA  
Sbjct: 85  PAE-LGMERPLEEPDAETALEHKQRLERLSHALAELPPRCREVFLLHKFDGLSHADIAAR 143

Query: 139 SGKTEAGCRQQLHRALMRLRGREA 162
            G + +   + + +AL   R R A
Sbjct: 144 LGISRSMVEKHVMKALAHCRDRLA 167