Pairwise Alignments

Query, 258 a.a., Ubiquinol-cytochrome C reductase, cytochrome C1 subunit from Variovorax sp. SCN45

Subject, 294 a.a., cytochrome c1 from Agrobacterium fabrum C58

 Score = 53.5 bits (127), Expect = 5e-12
 Identities = 54/251 (21%), Positives = 94/251 (37%), Gaps = 62/251 (24%)

Query: 43  DMAALQNGAKLFVNYCLNCHSAAFMRYNRLQDIGITEQQIKDNLLFTTDKVGETMKANID 102
           D   LQ G K++   C  CHS + + +  L D+G +++Q+K        + G   +  + 
Sbjct: 62  DKGQLQRGLKVYKEVCSACHSMSLVSFRTLGDLGYSDEQVKAFAAEYEVQDGPNAEGEMY 121

Query: 103 PRQA--KDWF---------------GTTPPDLTLVARSR-----------------AGHG 128
            R+A   D F               G  PPD++L+A++R                  G+ 
Sbjct: 122 NRKAVPSDHFPSPFPNHEAAAAANGGAAPPDMSLLAKARGVERGFPQFIIDMIPIVGGYQ 181

Query: 129 GTGADYLYTYLRTYYR-----DDTKATGWNNLAFPSVAMPNPLWELQGERRPVYTKVEQH 183
             G DY++  L  Y       + ++ T +N     + A+         +  P  +     
Sbjct: 182 EGGPDYIHALLTGYQEPPAGVEISEGTHFNPYFVSAAAL---------KMAPPISA---- 228

Query: 184 GHETEVFKGWEQVTPGTLTPVQYDNAVGDLVSYLQWMAEPAQNTRIRIGVWVLLFLAMSV 243
                     +QVT     P   D    D+ ++L W AEP    R R G  V++FL +  
Sbjct: 229 ----------DQVTYDDGAPQTVDQYSKDVAAFLMWAAEPHLEARKRTGFMVMVFLFIFT 278

Query: 244 VFVWRLNASYW 254
             ++    S +
Sbjct: 279 ALIYLTKKSVY 289