Pairwise Alignments

Query, 512 a.a., Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA from Variovorax sp. SCN45

Subject, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

 Score =  312 bits (799), Expect = 2e-89
 Identities = 180/446 (40%), Positives = 257/446 (57%), Gaps = 21/446 (4%)

Query: 24  RRWVGALLTLLLLAILGGGAWYLIQRAKTPAGAPGAAPGGRPGGPGGAGGPG-ARGGGGP 82
           RRW+  LL LLL+A L   AW+L          P A P  +  G G  GG G    GG P
Sbjct: 10  RRWLVGLLILLLVAAL---AWWLW---------PAATPAHKEAG-GVRGGKGMGMIGGRP 56

Query: 83  GGPGGAATSTVGIATAKKADIPVQLEALGTVTPLANVVVQPQVSGVLTAVLFQEGQMVKK 142
           G  G +    V +   +  D P+  +ALGTVT    V V+ +V+G L  + F+EGQ VK 
Sbjct: 57  GFGGSSDPVPVRVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKA 116

Query: 143 GDVLATIDPQPFQNALAQATGARQRDEAQLAAARVTLSRYQTLLGQDSIARQDVDTQAAL 202
           GD+LA IDP+P++ AL QA G   +++AQL  A+V L+RY+ L  +DSIA+Q +DT  A 
Sbjct: 117 GDLLAEIDPRPYRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQ 176

Query: 203 VKQLEGTVAIDRANENTAKLNLTWSRITAPVSGRIGLRPVDAGNYISTGATNGIATITQI 262
           V Q +G V  ++A  N A+LNL +++I AP+SGR+GLR +D GN ++   T  +  ITQ 
Sbjct: 177 VAQFQGLVKTNQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQT 236

Query: 263 TPIDVEFAIPQDRVPEVQDRLAQGAKLDATAFDRTRTRRLATGAFATLDNLVDTATGTVK 322
            PI+V F +P+  +  V +R   GA L   A+DR  ++  +TG   ++DN +DT TGT+K
Sbjct: 237 EPINVAFTLPETELSTVLERYRSGASLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLK 296

Query: 323 AKARFSNADNTLFPNQFVNLRLLLRTVDSAVVVPVTALRHGPNGDYVYVLKDDSTVAQRT 382
            K RF N D  LFPNQFVN+RLL  T+   V+ P  A++ G +G + YV+ + STV  R 
Sbjct: 297 FKGRFENKDLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRK 356

Query: 383 VTRGEASVDNVAIMSGLTAGEQVVTEGGDRLKDGARVQTTVDRPAAPPAGAASGERRGHR 442
           +  G +  +N  I+ GL AG+++V EG DRL++G +V+   D    P +        G  
Sbjct: 357 LKVGASDGENSVILDGLKAGDRLVLEGTDRLREGTKVEVVEDSSQVPTS-------PGQH 409

Query: 443 GNGERGSGRREGGAAGAGAPSGGAGA 468
             G+   G  + G A  G  +G AGA
Sbjct: 410 LQGQEAKGAAQTGEAQPGNAAGKAGA 435