Pairwise Alignments

Query, 512 a.a., Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA from Variovorax sp. SCN45

Subject, 413 a.a., Multidrug efflux pump subunit AcrA from Acinetobacter radioresistens SK82

 Score =  152 bits (385), Expect = 2e-41
 Identities = 103/350 (29%), Positives = 177/350 (50%), Gaps = 12/350 (3%)

Query: 93  VGIATAKKADIPVQLEALGTVTPLANVVVQPQVSGVLTAVLFQEGQMVKKGDVLATIDPQ 152
           VG+  A+   +   +E  G  +P     V+PQ SGV+   LF EG  V++G  L  ID +
Sbjct: 46  VGVLVAQPRSVEQSVELSGRTSPYQISEVRPQASGVIQKRLFTEGSYVRQGQALYEIDSR 105

Query: 153 PFQNALAQATGARQRDEAQLAAARVTLSRYQTLLGQDSIARQDVDTQAALVKQLEGTVAI 212
             +  +A A     R +A L   RV   RY+ L+G ++I+RQ+ D   A VK  +  V  
Sbjct: 106 TNRENVASARATLNRQQANLNVLRVKEGRYRQLVGTNAISRQEYDDIVAQVKLAQADVNA 165

Query: 213 DRANENTAKLNLTWSRITAPVSGRIGLRPVDAGNYISTGATNGIATITQITPIDVEFAIP 272
            +A    A++NL +S + AP+SG+     V AG  ++   T  + TI Q+ PI V+    
Sbjct: 166 SQAELRNAEINLGYSTVRAPISGQSSRSSVTAGALVTASQTEPLVTIQQLDPIYVDINQS 225

Query: 273 QDRVPEVQDRLAQGAKLDATAFDRTRTR-RLATGAFATLD-NL------VDTATGTVKAK 324
              +  ++ +L QG   + ++ + T+ + RL  G+   ++ NL      VD  TGTV  +
Sbjct: 226 SAELLRLRQQLNQG---NLSSSNNTKVKLRLEDGSEYPIEGNLAFSGASVDPETGTVTLR 282

Query: 325 ARFSNADNTLFPNQFVNLRLLLRTVDSAVVVPVTALRHGPNGDYVYVLKDDSTVAQ-RTV 383
           A FSN ++ L P  +   +++   + +A+++P  A+   P G  V ++ +   +A+ R V
Sbjct: 283 AVFSNPNHLLLPGMYATAKIVQAVIPNAMLIPQAAITRLPTGQAVAMIVNAKGLAESRPV 342

Query: 384 TRGEASVDNVAIMSGLTAGEQVVTEGGDRLKDGARVQTTVDRPAAPPAGA 433
                   +  + SG+ AGE+V+ EG  ++K+G +V     +P A   G+
Sbjct: 343 QTAGVQGKDWIVTSGIQAGERVIVEGIAKVKEGQKVNPKPLQPQAAAQGS 392