Pairwise Alignments

Query, 1038 a.a., Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) from Variovorax sp. SCN45

Subject, 1056 a.a., Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB-like from Variovorax sp. SCN45

 Score =  966 bits (2496), Expect = 0.0
 Identities = 519/1040 (49%), Positives = 716/1040 (68%), Gaps = 31/1040 (2%)

Query: 1    MSPSRPFILRPVATSLLMVAIVLAGLVAFRFLPLSALPQVDYPTIQVQTLYPGGSPEVMS 60
            +S S  FI RP+ T+LL +AI+L G   F  LP++ LPQVD+PTIQV    PG SPE M+
Sbjct: 1    LSISATFIKRPIGTTLLALAILLVGAAVFPLLPVAPLPQVDFPTIQVSASLPGASPETMA 60

Query: 61   NTVTAPLERQFGQMSGLDRMSSTSAAGVSIITLQFSLGQTLDVAEQEVQAAINAGGSLLP 120
            + V  PLER F  ++GL +M+STS  G + ITLQF L +++D A  +VQAAINA    LP
Sbjct: 61   SNVAQPLERNFSLIAGLSQMTSTSGLGNTQITLQFDLDRSIDAAALDVQAAINASTGQLP 120

Query: 121  ADLPAPPVYAKVNPADAPVLTLSITSDTLPLTEVQNLVNTRLAQKISQVSGVGLVSLSGG 180
            A+LP+PP + KVNPADAP+L LS+ S TLPLTEV +  +  LAQ+ISQ+SGVGLV++ G 
Sbjct: 121  ANLPSPPTFRKVNPADAPILILSVQSKTLPLTEVNDYADNILAQQISQISGVGLVNIGGV 180

Query: 181  QRPAVRIQANTQALATNGIGLDTLRTAIAAANSNGAKGSFDGPKRAYTINSNDQLLTVDD 240
            Q+PAVR+Q +   LA  G+ L+ +RT +A+A  N  KG+ DGP +++T+ +NDQLL    
Sbjct: 181  QKPAVRVQVDPAKLAALGLSLEDVRTVLASATVNAPKGTIDGPNQSFTVYTNDQLLKAQP 240

Query: 241  YKNLIVSYKNGAPIRMVDVAQVVNSAENTQLSAWA--------GSKTESGTKLIPAIIMN 292
            + +++++Y+NGAPIR+ D+   V+  EN++++ WA        GS  ++G     +I++ 
Sbjct: 241  WNDVVLAYRNGAPIRVRDLGVAVDGPENSKIAGWAYAGAAAPAGSNVQNGR----SIVLA 296

Query: 293  VQRQPGANVIATVDAIKAQLPELQAGLPTGLNISVLSDRTAGIRASVEHVEMELVLAVVL 352
            + +QPGANVI TVD I A LP L+A +P  ++++ + DRT  IRASV+ VE  L+L + L
Sbjct: 297  ITKQPGANVIETVDRINAALPRLKASIPPTVDVNAIIDRTQTIRASVKDVEFTLLLTIAL 356

Query: 353  VVLVIFAFLGSLRATVIASIAVPISLIGTFGLMYLLGYSLNNLSLMALTIATGFVVDDAI 412
            VV VIF FL ++ AT+I S+ VP++L+GT G+MYLLGYSL+NLSLMALTIA GFVVDDAI
Sbjct: 357  VVAVIFVFLRNVPATLIPSVTVPLALLGTVGVMYLLGYSLDNLSLMALTIAVGFVVDDAI 416

Query: 413  VMIENIARYIEEGEKPLQAAFKGATQIGFTIISLTVSLIAVLIPLLFMGDVVGRLFREFA 472
            VM+ENI RY+EEG   ++AA+KGA +IGFTIIS++VSL+AV IPLL MG +VGRLFREFA
Sbjct: 417  VMLENIYRYVEEGMTAMEAAYKGAGEIGFTIISISVSLVAVFIPLLLMGGIVGRLFREFA 476

Query: 473  VTLAITILISAVVSLTLVPMMSARWLKHEPKRDTGGSGFGARAQRF---FDGVMVRYDRS 529
            VT+ +TI++S ++SLTL PM+ +R+LK+E      G+  G   Q F   FD ++  Y R 
Sbjct: 477  VTVTLTIVVSVIISLTLTPMLCSRFLKNEH-----GNKHGRLYQLFERGFDAMLNGYKRG 531

Query: 530  LHWVIDHQPLTLLVALLTMVLTVVLYLTIPKGLFPTQDTGQLQARIQAAQDVSFDRMSQL 589
            LH V+DHQ +TL+V + T+  T VL+  IPKG FP QDTG +    ++AQD SF  M+  
Sbjct: 532  LHVVLDHQFITLMVFIATVAATGVLFAVIPKGFFPQQDTGFISGFAESAQDASFASMNAR 591

Query: 590  QQEAAHAILEDPEVENLSSFVGVDAANNTMLHTGSMLINLK-KGHG---DQQKIMDRLRE 645
              + A  + +DP+V       G++ +++T  +TG+  I+LK K  G      +I+ RLR 
Sbjct: 592  MIQLADVVRKDPDVTGF----GMNGSSSTY-NTGNFYISLKPKDEGRTATADEIITRLRP 646

Query: 646  HVHGVAGVTLYLQPTQDLTIDAETGPTEYRVSLEGVDSAAITAWMKKLVARLQDSDKVRN 705
             +  V GV L+LQ  QD+ +      T+Y+ ++   D   +  W  KL+AR +   ++ +
Sbjct: 647  QLAKVQGVNLFLQAGQDIRVGGRASRTQYQYTVTDADLDELNTWAPKLLARFKQLPELTD 706

Query: 706  VSSDAGAQGLAAFVNVNRDTAARLSITASTVDDALYSAFGQRIVSTIFTETNQYRVILEA 765
            +++D      +A + ++RD A+   I+ +T+D  LY A GQR V+  FT+ N Y V+LE 
Sbjct: 707  LATDQQNAAASAVLTIDRDRASSFGISPATIDATLYDAIGQRQVAQYFTQLNSYHVVLEV 766

Query: 766  MPGMVNTPQTLGQLSLIAG-SGTATPLSAIANI-SEQQAPLQITHVAQYPASTLNFDTAP 823
             PG+   P    +L L +  +G   PLS    + + + A L I+H  Q+PA T++F+ AP
Sbjct: 767  TPGVQQDPALFSKLYLSSPITGQQVPLSTFVKVDTSKTAYLSISHQGQFPAVTISFNLAP 826

Query: 824  GVSLGSSVDAIRAAAKEIGLPSSITMTFLGASGAYEKSLSNQLWLILAAVVCVYIVLGVL 883
            GV+LG +V+AI  A  E+GLP S+T +F G + A++ SL+ Q +LI AA+V VYIVLG+L
Sbjct: 827  GVALGDAVNAINKAQAEMGLPQSLTGSFQGTAQAFQDSLATQPYLIAAALVAVYIVLGLL 886

Query: 884  YESYVHPLTILSTLPSAGVGALLALMITGNDLGVIGIIGIILLIGIVKKNAIMMIDFAID 943
            YESY+HPLTILSTLPSAGVGALL LM  G DL VI +IGIILLIGIVKKN IMMIDFA+ 
Sbjct: 887  YESYIHPLTILSTLPSAGVGALLILMAGGYDLSVIALIGIILLIGIVKKNGIMMIDFALK 946

Query: 944  AERNQGKSAREAIHQAALLRFRPILMTTLAALFAAVPLMLSFGDGAELRRPLGLAIFGGL 1003
            AER QG S  +AI+QA LLRFRPI+MTT+ AL + +PLML  G G+ELRRPLG A+ GGL
Sbjct: 947  AEREQGMSPHDAIYQACLLRFRPIMMTTMCALLSGLPLMLGHGSGSELRRPLGYAMVGGL 1006

Query: 1004 IVSQLLTLFTTPVIYLAFDR 1023
            I+SQ LTLFTTPV+YL  DR
Sbjct: 1007 ILSQALTLFTTPVVYLYLDR 1026