Pairwise Alignments

Query, 1096 a.a., Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) from Variovorax sp. SCN45

Subject, 1029 a.a., multidrug efflux RND transporter permease subunit MdtC from Dickeya dianthicola ME23

 Score =  983 bits (2541), Expect = 0.0
 Identities = 546/1078 (50%), Positives = 724/1078 (67%), Gaps = 71/1078 (6%)

Query: 7    FVRRPIGTVLLTIGVALAGIAAFFVLPVSPLPQVDYPVISVSAAIPGASPETMATSVATP 66
            F+ RP+ T LL + +AL G+  + +LPVSPLPQVDYPVISV+A +PGASPETMA+SVATP
Sbjct: 7    FIHRPVATTLLALAIALCGLIGYQLLPVSPLPQVDYPVISVTATLPGASPETMASSVATP 66

Query: 67   LERHLGTIAGVNEMTSTSSVGTSRVTLQFDLSRDINGAAREVQAAISASRVDLPATLRSN 126
            LER LG IAGVNEMTSTSS+G +R+ LQF L RDINGAAR+VQAAI+A++  LP+++ S 
Sbjct: 67   LERSLGRIAGVNEMTSTSSLGNTRIILQFALDRDINGAARDVQAAINAAQSLLPSSMPSR 126

Query: 127  PTYRKANPASSPVIILALTSKTKTPGQIYDAVSNIVSQRLSQVDGVGDVEIGGGSLPAVR 186
            P YRK NP+ +P++I+ LTS T  PGQ+YD  S  ++QR+SQ+DGVGDV IGG SLPAVR
Sbjct: 127  PYYRKVNPSDAPIMIITLTSDTYGPGQLYDYASTQIAQRVSQIDGVGDVTIGGSSLPAVR 186

Query: 187  IELLPFALSRYGISTDDVRAAIQASNANRPKGMVQGEGRKLQIYTQTPALRASDYAPMVI 246
            + L P AL   G+S D VR +I  SN  +P G V       QI T      A  Y  +++
Sbjct: 187  VALNPQALFNQGVSLDAVRQSIAQSNVRQPLGSVDSGSTHYQIQTNDELKTADAYRSLIV 246

Query: 247  AWRNGAAVRLQDVAEVLDGVEDTRTLGLFNGEPAIIVLITRQPSANIIETVDSVRALLPE 306
             + NGA VRL DVA V D V++    G+ N +PA++V+I R P ANII TVD++RA +PE
Sbjct: 247  HYNNGAPVRLSDVATVKDSVQNVLNAGMTNAKPAVLVMIRRAPDANIISTVDAIRASMPE 306

Query: 307  LQAQLPPDVTLQVASDSTNSIRGSLREVEFTLVISVILVVLVVSLFLRSARATIVPAVAT 366
            LQA LP  +TL VA D + +IR SLR+VE +L I+V LV+LVV LFLRS RAT++PA+A 
Sbjct: 307  LQALLPASITLNVAQDRSPTIRASLRDVERSLTIAVSLVILVVFLFLRSGRATLIPAIAV 366

Query: 367  VAALLGTFGVMYLLGFSLNNLSLMALTVATGFVVDDAIVVLENTSRHIESGMTRMKAALL 426
              +L+GTF  MYL GFSLNNLSLMALTVATGFVVDDAIVVLEN SRHIE+GM  ++A+L 
Sbjct: 367  PVSLIGTFSAMYLCGFSLNNLSLMALTVATGFVVDDAIVVLENISRHIEAGMKPLQASLQ 426

Query: 427  GAKEVGFTVLSISVSLVAVFIPLLFMGGQVGRLFREFAVTLSAAVMISLVISLTTTPMMC 486
            G +EVGFTV+S+S+SL+AVFIPLLFM G  GRLFREF++TLS A++ISL++S+T TPMMC
Sbjct: 427  GVREVGFTVVSMSLSLIAVFIPLLFMDGLPGRLFREFSITLSVAILISLLVSITLTPMMC 486

Query: 487  AWMLKPGGEHDKNKPQGRFGRMAARSYDWVLKRYENSLDWALDSKGLVMLILVAVVGLNV 546
            A +L+      + + +G F R+       + + Y  SL W L+    VM++L+  +GL+V
Sbjct: 487  ARLLRLHTPRSQPRTRG-FNRLLL----GLQQGYGRSLRWVLNHSRWVMMVLLCTIGLSV 541

Query: 547  YLFSAAPKGFFPQQDSGQLNGGLRADQSISSKAMAAKLREVVDIIRADEAVDTVVGFTGG 606
            +L+ + PK FFP+QD+G+L G ++ADQSIS +AM  KL++ + I+RAD AVD V GFTGG
Sbjct: 542  WLYISIPKTFFPEQDTGRLMGFIQADQSISFQAMKRKLQDFMTIVRADPAVDNVTGFTGG 601

Query: 607  SRAGGGFMFVNLKPASQRKDSGLAVIARLRPKLNAVAGLRVFLGTVQDVRSGGRSSNSTY 666
             R   G MF++LKP +QR  S   VI RLR  L    G  ++L  VQDVR GGR +N  Y
Sbjct: 602  MRTNSGSMFISLKPLAQRDVSAQQVITRLRANLAKEPGANLYLMAVQDVRIGGREANGGY 661

Query: 667  QYTLKSDNLADLRTWASKLADEMKLQPVLTDIDTDQTENGVETMANVDKNTANRLGITST 726
            Q++L SD+LA LRTW  K+ D +   P L D+ +DQ + G E M   D++   RLGI   
Sbjct: 662  QFSLLSDDLAVLRTWEPKIRDALSKLPQLADVSSDQQDKGAELMMVYDRDAMARLGINVA 721

Query: 727  AVDNALYNAFGQRQVATIYTELNQYHVVMEWAPRYTLSPNALSDVYVPATKTTVVAGQAV 786
            +V+  L NAFGQRQ++TIY  +NQY VVME    YT  P++L  ++V         G+ +
Sbjct: 722  SVNALLNNAFGQRQISTIYQPMNQYKVVMEVDSAYTQDPSSLDKMFVINND-----GKPI 776

Query: 787  TTQVAAPTTTANSALSASKTAAGSTAASSSSTAVPVSANPALRNASSGNVLSNTATSL-V 845
                 A    AN+ L+ +    G +AA++ S  +P  A  +L +A++   +  T T+L V
Sbjct: 777  PLSFFARWQPANAPLAVNH--QGLSAAATLSFNLPEGA--SLSDATT--AIERTMTTLRV 830

Query: 846  PLSAVAKFYENSVATSVSHQDGELATTVSFNLVEGANLGDAREAIAKAEANIAMPTNVRG 905
            P +   +F      T+++ Q                                        
Sbjct: 831  PSTVRGQF----AGTALAFQ---------------------------------------- 846

Query: 906  AFAGTAASAQQSQSQQAMLILAALVVIYIVLGILYESLVHPITVLSTLPSAGVGAVLALL 965
                    +Q SQ    +LI+AA++ +YIVLGILYE++ HP+T+LSTLPSAGVGA+LAL 
Sbjct: 847  -------QSQHSQ---VVLIIAAILTVYIVLGILYENVAHPLTILSTLPSAGVGALLALE 896

Query: 966  MFRMEFSIIALIGVFLLIGIVKKNAILIIDFALEAERSRGLSPLEAVREACLLRFRPILM 1025
            +F   FS+IALIG+ LLIGIVKKNAI+++DFAL A+R   L   EA+  AC+LRFRPI+M
Sbjct: 897  LFGKPFSLIALIGILLLIGIVKKNAIMMVDFALVAQREGKLPAREAIFRACMLRFRPIMM 956

Query: 1026 TTMAAALGALPLAIGFGEGAELRRPLGVAIIGGLIASQMLTLLTTPVVYLLLDKLRRR 1083
            TTMAA  GALPL +  G+G+ELR+PLG+ I+GGL+ SQ+LTL TTPVVYL  D L+ R
Sbjct: 957  TTMAALFGALPLVLSNGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDSLQWR 1014