Pairwise Alignments

Query, 497 a.a., Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system from Variovorax sp. SCN45

Subject, 471 a.a., Multidrug efflux RND outer membrane protein OprN from Pseudomonas putida KT2440

 Score =  198 bits (503), Expect = 4e-55
 Identities = 142/469 (30%), Positives = 225/469 (47%), Gaps = 24/469 (5%)

Query: 16  LSLSALALAALLAGCSVGPLYHQPVTALPNNWKEQKAAEGWLPAAPADALDRGE----WW 71
           L+ S LALA  LA C+VGP Y  P T        Q +++       A A DR      WW
Sbjct: 7   LTPSLLALA--LAACAVGPDYQAPATE-----PAQLSSD-----VQAKAYDRSRFESLWW 54

Query: 72  KLFGDPTLDELASRVQVSNQNIAAAVANYANAQALVRGQRAALFPQVSLNGS---GKRSD 128
           K F DP L++L       N+++  A A   +A+++        FP V+   S   GK   
Sbjct: 55  KQFDDPVLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTSRASSDLGKGQI 114

Query: 129 TGSTSP---SNAFAATLDATWAPDVWGRLRESVNSASANAQASEADLASARLSAIGTMAT 185
            G T+    S  +   LD  W  D++GR++  + ++ A    + ADL   ++S I  +  
Sbjct: 115 PGQTTERVNSERYDLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAELVD 174

Query: 186 NYLSLREADVEIGLLDQTIEGYERAYTITSNRYKAAIAAQSDVLQAQSQLATARATRLTL 245
            Y  LR A +   +    ++  + + TIT     A +    DV++A ++LA   AT   L
Sbjct: 175 AYGQLRGAQLREKIALANLKTQQESRTITETLRDAGVGNDLDVVRADARLAGVEATVPQL 234

Query: 246 VRNRATFEHAIAVLVGAVPADFS--LPPAAWKQTVPGIPTGVPSTLLQRRPDIAAAERSV 303
              +A   H IA L+G  P   S  L P A       +P G P  LL+RRPDI +AER +
Sbjct: 235 QAEQARARHRIATLLGQRPDALSVDLSPKALPAIAKALPVGDPGELLRRRPDIRSAERQL 294

Query: 304 ASANSQIGIARSAYFPSFNLNAAIGSSASRVGDLFSAPNSLWSLGLSAAQVVFDAGAISA 363
           A+A + +G+A +  FP  +L+  +G +A+R   + S+  + W+LG S     FD G++ A
Sbjct: 295 AAATANVGVATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAFDLGSVRA 354

Query: 364 SVDAAKASYDASVARYRQTVLAAFQGVEDQLTAGATLAQQEGMYREASEAADKTEQILLN 423
            +  AKA  + ++A Y Q VL A +   +  +      Q+       S+A+ K  ++   
Sbjct: 355 RLRGAKADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAAELASI 414

Query: 424 QYRSALVAYTDVVTAQVAALNARRTLVQVQLNRQIAAVSLIQALGGGWQ 472
           +YR   V Y  ++ A+   L+A     Q +++     VS+ +ALGGGWQ
Sbjct: 415 RYREGTVDYLVLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGWQ 463