Pairwise Alignments

Query, 304 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

 Score = 84.3 bits (207), Expect = 4e-21
 Identities = 68/253 (26%), Positives = 111/253 (43%), Gaps = 8/253 (3%)

Query: 14  AFALAFAALLPLSAAQAQESDTLAKIKASGAITFGYRESSFGFSYLDGNLKPIGYSIDIC 73
           A   A AAL  +S AQA    TL  +K  G +  G  +   GFS  D   K +G   D+C
Sbjct: 9   AVLTAAAALGAVSTAQA--GATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVC 66

Query: 74  NRIVEAVKTELKMPAIEVKYQAVTSANRIPLVQNGTVDIECGSTTNLVERQKQVA--FSP 131
             +  AV  +    A +VK+  + +  R   +Q+G VD+   +TT    R   +   F+ 
Sbjct: 67  RAVAAAVFGD----ATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 132 DIFRYNVRMLVKADSGIKSIADLQGKTVATTSGTTSFRLLREADRGRGLDVTNLPGKDHS 191
             +   V  LV    G+ S  +L G T+   +GTT+   + +  R  GL  T +      
Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182

Query: 192 DSFLLVESGRAQAFVLDDILLAGQIANARSPKDFTITGESLRTENQSLMFRKDDPVFKAL 251
           +S   +ESGR      D   L  Q +   +P ++ +  E++  E    + RK D  + ++
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 252 VDRVVSGMMKSGE 264
           V   +  M+ + E
Sbjct: 243 VKWTLFAMLNAEE 255