Pairwise Alignments

Query, 579 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 603 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score = 68.2 bits (165), Expect = 9e-16
 Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 21/242 (8%)

Query: 351 FNTELIEEVNAAKADLAATLAQQH-------ALELTHARIGERMNLVSDLHDGLGGMLVG 403
           F    + ++ A K D AA     H       A+E T +   ER ++  DLHDGLG  L  
Sbjct: 352 FRLTALRDITARKEDEAAARIALHMEHLRNLAIEATLSEERERHSIAKDLHDGLGQTLHL 411

Query: 404 SIAKLER----TPEDLS----APELLAMLKHLRDDLRLIIDATGRDDGARALGELLAPMR 455
           +  KL+R     P++L     A EL+ +L     ++R +          + LG L+A + 
Sbjct: 412 ARFKLDRLVKALPQELPTATLALELIGLLSEASGEVRSLTSKLS-PPALKDLG-LVAAIS 469

Query: 456 YRSAQLLDANGIDCRWSVSNIETLELPASQSLDLMRFLQEALTNVLKHSASRRVDVTVAR 515
           + + ++    G+        +    L   QS  L R ++E + N+ KH+      + +  
Sbjct: 470 WLADEMGRRRGLQVVVEDDGVPK-PLTEGQSTLLFRAVRELVINIAKHAGVGSARIGLRV 528

Query: 516 AGAELRLSVRDDGRGFV--VENIDKATGAGLRSLRARARRLGAQLQLQSRPGE-TQVLLR 572
               L ++V D G GF+     ++   G GL S+R R   L   + +Q+RPGE T V+L 
Sbjct: 529 CNNRLIITVADKGVGFIDWRATLEARRGFGLSSVRERITFLKGVMDIQTRPGEGTTVVLE 588

Query: 573 MP 574
           MP
Sbjct: 589 MP 590