Pairwise Alignments

Query, 313 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 306 a.a., Oligopeptide transport permease protein OppB-like @ Glutathione ABC transporter, permease protein GsiC from Variovorax sp. SCN45

 Score =  248 bits (633), Expect = 1e-70
 Identities = 128/313 (40%), Positives = 193/313 (61%), Gaps = 8/313 (2%)

Query: 1   MLTFLGKRLLATLPVLLVVAVAIFMIVRLTPGDPAAVIGGNSATNEDLDRIRVQLGLTRP 60
           ML +  KRLL  +P LL+VAV +F+ V + PGDPA +  G  A  + +  +R +LGL +P
Sbjct: 1   MLNYFLKRLLGLIPTLLIVAVLVFLFVHMLPGDPARLAAGQEADEQTVAMVRAELGLDKP 60

Query: 61  LWEQFAIWCNGVLHGDLGFSFFLNKPVTELIGQRMEPTLSLAGGTLLLAVAIALPLGTLA 120
           L +QF  +   +L GD G S    +PV+  IG+R  PT+ L   +++ AV   + +G ++
Sbjct: 61  LPQQFVNFFTHMLQGDFGTSIRTRRPVSVEIGERFFPTVMLTITSMVWAVIFGMGIGIVS 120

Query: 121 AWRMGGWLDKAVMAFSVAGFSVPVFVVGYVLIYLLAMKLQWFPVQGYRRIADGVGPWLHQ 180
           A     W D+  M  +V+G S P F +G +L+ + +++L W P  G          W H 
Sbjct: 121 AVYRNKWPDRLGMTLAVSGISFPAFALGMLLMQIFSVQLGWLPTVG-------ASSWKHY 173

Query: 181 LVLPCLTLAITYVALLSRVTRAAVSEALTEDFIRTARAKGITELEVLKHHALRNAAVPVV 240
            +LP +TL     A+++R TRA+  E + EDF+RTARAKG+ E  V+  H LRNA +PVV
Sbjct: 174 -ILPSITLGAAVAAVMARFTRASFVEVIQEDFVRTARAKGVRESSVVFKHTLRNALIPVV 232

Query: 241 TVIGVSAALLLGGVVVTETVFAIPGLGQLTVDAVLNRDFPVLQGVVLFFAVVYVAVNLLV 300
           T++G+    LLGG ++ E VF  PGLG+L VDAV  RD+PV+Q +VL F++ ++ +NL+V
Sbjct: 233 TMMGLQFGFLLGGSILVEAVFNWPGLGRLLVDAVQMRDYPVIQTLVLLFSLEFILINLVV 292

Query: 301 DLSYLFIDPRIRY 313
           D+ Y +I+P IRY
Sbjct: 293 DVLYGYINPTIRY 305