Pairwise Alignments

Query, 290 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  190 bits (482), Expect = 4e-53
 Identities = 109/292 (37%), Positives = 168/292 (57%), Gaps = 19/292 (6%)

Query: 2   STLKRLW----RNTAVRGGVVVLAVLALLGAFAPWLGTFDPSAMDPSFISVGAGTAGQVT 57
           S  K  W    RN     G+  + ++     FAPW+   DPS     F+         +T
Sbjct: 23  SPYKEFWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFL---------LT 73

Query: 58  MP---DGAQFAHTFWMGSDSVGRDVWSRVLYGTRISMTVGLFTAFVAIAFGCLLGMLAGY 114
            P   +G  +   F +G+D +GRD+ SR++ G R+S+ +GL +  +++  G LLG+LAG+
Sbjct: 74  PPVWLEGGTWQ--FILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGF 131

Query: 115 F-RAVDAVLMRVMDGVMAIPAVLLAITLVAVLGASLPTVILAIAVPEVPRVTRLVRALVM 173
           F + +   +MR+MD ++A+P++LLA+ +VA+LG  L   ++AIA+  +P   RL RA VM
Sbjct: 132 FPQLLGPSIMRLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVM 191

Query: 174 SLRDEPFVEAARALATADATILWRDILPNALAPLIVQGTFIAASAVLTEAILSFLGLGLP 233
              +  +V AAR        +++  +LPN +APLIVQ T   +SA+L  A L FLGLG+ 
Sbjct: 192 GELNRDYVTAARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQ 251

Query: 234 SDVPTWGNIMAEGRVQFSQSPGNVLFPALFLVPTVLAINMLGDGLRDVLDPK 285
              P WG ++A  R    ++   V  P L ++ +VLAIN++GDGLRD LDPK
Sbjct: 252 PPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPK 303