Pairwise Alignments

Query, 290 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  173 bits (439), Expect = 4e-48
 Identities = 99/271 (36%), Positives = 150/271 (55%), Gaps = 15/271 (5%)

Query: 16  GVVVLAVLALLGAFAPWLGTFDPSAMDPSFISVGAGTAGQVTMPDGAQFAHTFWMGSDSV 75
           G V++ ++ L+  F+PWL T DP+A+D            ++  P  A      W G+D V
Sbjct: 36  GAVIIVLMLLMMIFSPWLATHDPNAID---------LTARLLPPSAAH-----WFGTDEV 81

Query: 76  GRDVWSRVLYGTRISMTVGLFTAFVAIAFGCLLGMLAGYFRA-VDAVLMRVMDGVMAIPA 134
           GRD++SRVL G++ S+  GL    +A   G LLG L+G      DA++MR+MD +++IP+
Sbjct: 82  GRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPS 141

Query: 135 VLLAITLVAVLGASLPTVILAIAVPEVPRVTRLVRALVMSLRDEPFVEAARALATADATI 194
           ++L + L A LG SL   +LAIA+  +P   RL R   + +R   +V+AA+    +   +
Sbjct: 142 LVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHL 201

Query: 195 LWRDILPNALAPLIVQGTFIAASAVLTEAILSFLGLGLPSDVPTWGNIMAEGRVQFSQSP 254
           +   IL N+L PLIVQ +    SA+L  A L F+GLG       WG ++A GR       
Sbjct: 202 INWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQW 261

Query: 255 GNVLFPALFLVPTVLAINMLGDGLRDVLDPK 285
               FP   ++ T +  N+ GDG+RD+LDPK
Sbjct: 262 WYCAFPGAAILLTAVGFNLFGDGIRDLLDPK 292