Pairwise Alignments

Query, 290 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 268 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  194 bits (492), Expect = 2e-54
 Identities = 103/278 (37%), Positives = 160/278 (57%), Gaps = 15/278 (5%)

Query: 9   RNTAVRGGVVVLAVLALLGAFAPWLGTFDPSAMDPSFISVGAGTAGQVTMPDGAQFAHTF 68
           RN +   G++++   A+L   AP L   DP A   S I      A               
Sbjct: 3   RNKSALAGLIIVLFFAVLAIAAPILPIADPVATSWSAIRKAPSAA--------------H 48

Query: 69  WMGSDSVGRDVWSRVLYGTRISMTVGLFTAFVAIAFGCLLGMLAGYFRA-VDAVLMRVMD 127
           W+G+D +GRD+ SR++YG R S+  G+ +  +A+  G   G++AGYF   VD V+ R+ +
Sbjct: 49  WLGTDDLGRDILSRMIYGARASLMAGVVSVMIAVVIGVPFGLIAGYFGGWVDMVISRITE 108

Query: 128 GVMAIPAVLLAITLVAVLGASLPTVILAIAVPEVPRVTRLVRALVMSLRDEPFVEAARAL 187
            ++A+P +++AI L A LG SL   ++AI +  +P   RL R  V++++ E +VE AR++
Sbjct: 109 ALLAMPFLIMAIALAAFLGPSLTNAMIAIGLSAMPIFVRLTRGQVLAVKMEDYVEGARSI 168

Query: 188 ATADATILWRDILPNALAPLIVQGTFIAASAVLTEAILSFLGLGLPSDVPTWGNIMAEGR 247
                 I+ R ILPN  AP+IVQ T   A+A++ EA LSFLGLG  +  P+WG+++   +
Sbjct: 169 GLNHIDIMTRYILPNVFAPIIVQATLTVATAIIAEASLSFLGLGQQAPAPSWGSMLNTAK 228

Query: 248 VQFSQSPGNVLFPALFLVPTVLAINMLGDGLRDVLDPK 285
              SQ+P   L+P + +   V+  N+LGDGLRD LDP+
Sbjct: 229 NFLSQAPWMTLWPGIAIFLVVIGFNLLGDGLRDALDPR 266