Pairwise Alignments

Query, 290 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 282 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  172 bits (436), Expect = 8e-48
 Identities = 88/216 (40%), Positives = 141/216 (65%), Gaps = 1/216 (0%)

Query: 70  MGSDSVGRDVWSRVLYGTRISMTVGLFTAFVAIAFGCLLGMLAGYFRAV-DAVLMRVMDG 128
           +G+D +GRDV +RV+ G +IS+ VG  +   A+ FG  +G++AGY+R   D ++MR  D 
Sbjct: 61  LGTDPLGRDVLARVVAGGKISLLVGFTSVIGAVIFGVAVGLVAGYYRGFWDMLVMRFADI 120

Query: 129 VMAIPAVLLAITLVAVLGASLPTVILAIAVPEVPRVTRLVRALVMSLRDEPFVEAARALA 188
            +A+P +LLAIT +A++G SL   I+ + + +  +  RLVR  V++LR+  F+ +ARA+ 
Sbjct: 121 QLAMPFILLAITFIAIVGGSLTNTIILLIISQWVQYARLVRGSVLTLREREFILSARAIG 180

Query: 189 TADATILWRDILPNALAPLIVQGTFIAASAVLTEAILSFLGLGLPSDVPTWGNIMAEGRV 248
             D  I+ + +LPN + P+IV  T   A+ +L E+ L+FLGLG+   +P+WG ++A+GR 
Sbjct: 181 VKDWRIILQHLLPNLIGPVIVLMTLNVANNILLESSLTFLGLGVDPTIPSWGGMLADGRT 240

Query: 249 QFSQSPGNVLFPALFLVPTVLAINMLGDGLRDVLDP 284
               +    +FP L ++ TVL +N+LGD LRD LDP
Sbjct: 241 YLQTAWWVSVFPGLAILLTVLGLNLLGDWLRDSLDP 276