Pairwise Alignments

Query, 433 a.a., Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF from Variovorax sp. SCN45

Subject, 936 a.a., 4Fe-4S ferredoxin from Pseudomonas simiae WCS417

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 92/384 (23%), Positives = 141/384 (36%), Gaps = 61/384 (15%)

Query: 18  AEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGKEP-TRATQLH----- 71
           A+ ++ KC+ CGFC   CP+  L       PR RI + + +   K      T L      
Sbjct: 533 ADELVDKCIECGFCEPVCPSKGL----TLSPRQRIVIWRDIQAKKRAGVDTTDLEAAYHY 588

Query: 72  --LDRCLTCRNCESTCPSGVQYGHLV------DIGRKIVEEKVP---RPALEGALRWTLK 120
             +D C     C   CP G+  G LV      D  R    E +      AL+GA R+TL 
Sbjct: 589 QGIDTCAATGLCAQRCPVGINTGDLVKKLRSRDADRTKTAEWLATHFSTALQGA-RFTLH 647

Query: 121 EALPSPLFGAAMKLGQSVRGLLPQRLKAKVP---ARQPAGEWPMR------SHARKVLLL 171
            A  + +   A +L + +   + +  K ++P   A  P  E  +R          +V+ L
Sbjct: 648 VANGARMLLGAPRLAK-LSASMTKLSKGQIPQWTAAMPQPEKAIRFSPAVTDERPRVVYL 706

Query: 172 AGCVQPSMAP--------NINSATARVLDAAGIETLVAPAAG--CCGAVKFHLNDHEGGK 221
           A CV  +M P        ++   T  +L+ AG + +        CCG   F    +    
Sbjct: 707 AACVSRAMGPAAGDKEQMSLYDKTRSLLEKAGYQVVFPDNQDSLCCGQ-PFASKGYAEQA 765

Query: 222 AQMRANIDAWWPSVEEGAVEAIVMNASGCGVTVREYAHVLRDEPAYAEKAARISALTRDL 281
              R  +         G ++ I  + S C  T+R    +        +    I     D 
Sbjct: 766 EHKRQELIGALLHASRGGLDPIYCDTSPC--TLRLVQDLGDTRLDLYDPVRFIRTHLMDR 823

Query: 282 SQLLPELVPLLKDRVSAPQGVFAYHPPCTLQHGQKLRGGVEVNLRALGFDIQVARNEPHL 341
               P+  P+            A H  C+ QH  + +  +++  R       V   E   
Sbjct: 824 LDFTPQEAPI------------AVHVTCSTQHLGESQALIDLARRCSN---TVVIPEGIH 868

Query: 342 CCGSAGTYSVLQPEL-AYSLRDRK 364
           CCG AG      PEL A+SLR  K
Sbjct: 869 CCGFAGDKGFTTPELNAHSLRTLK 892



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 59  LEGKEPTRATQLHLDRCLTCRNCESTCPS 87
           L+  +P  A    +D+C+ C  CE  CPS
Sbjct: 524 LKHLKPLPAADELVDKCIECGFCEPVCPS 552