Pairwise Alignments

Query, 824 a.a., Conjugative transfer protein TrbE from Variovorax sp. SCN45

Subject, 903 a.a., Type IV secretion system protein virB4 from Acinetobacter radioresistens SK82

 Score =  111 bits (278), Expect = 2e-28
 Identities = 129/535 (24%), Positives = 223/535 (41%), Gaps = 48/535 (8%)

Query: 237 FPTSTWPGILDDLNRLGFAYRWSTRFLCLDKADAEKELIRLRRQWFAKRKNVVALLRETI 296
           +P  T   +LD+  ++      S  F+ +D+  +    I+ + Q           L+   
Sbjct: 357 YPEHTDHTMLDEFLKVDHPLLISQTFMMMDRRKSINMSIQRQNQ-----------LKNAK 405

Query: 297 FQQESPLVDTDASNKATDADAALQELGGDQVAFGYVTTTVTVLDTDPAAADEKLRRVERV 356
            + ES +   +A N+A D      +L   ++  G  +  V V   + AA  + +++    
Sbjct: 406 DKSESQI---EAINQAVD------DLASGRILNGIYSLNVLVTAKNGAAFKDAMQKTSGA 456

Query: 357 IQGRGFVTIPETLNAVEAWLSSVPGNAYANVRQPIVSTLNLAHLMPVSAVWAGPEKNAHL 416
            Q    +   E L A   + S++ GN +   R   ++T N A    +     G ++  H 
Sbjct: 457 FQRNHMLPKKEDLIAEPTFYSTLIGNYHLLQRPATINTTNFAGFASMHNSSIGKKEGNHW 516

Query: 417 GAPPLIVTRTEGATPFRLVTHIGDVGHTLVAGPTGMGKSVL---LATLAMQFRRYRGSRI 473
           G   L + +TEG TP+    H GDVGHT +   TG GK+ L   L T A +F+ Y    I
Sbjct: 517 GEYVLQL-KTEGNTPYYFNFHEGDVGHTRITTGTGGGKTTLINALLTAADKFKPY----I 571

Query: 474 FAFDMGRSMRATILGLGGEHYDLGMDGEIAFQPLARIDREGDRTWAAEWIEGRLRHEGVA 533
           F FD   S    I  +GG+H  L       + PL   D + +R +  +      +    A
Sbjct: 572 FHFDFEYSASVWIQAMGGKHTVLSEMVPTGWNPLQLDDTDQNRLFLNKLFAFMGQDYNEA 631

Query: 534 ITPDEKGA--------IWSALGSLAGAPLEQRTMTGLSVLLQSNALRQALAPYVLGGAHG 585
             P    A        +  A+ S        R    L  + ++N L + +A +   G   
Sbjct: 632 GNPKPLSAAEENKIKEVVEAVYSYEKTLRRLRNFISLFGMAENNNLAERMAKWANNGHFA 691

Query: 586 KLLDADHDRLEIADAGSADVQCFEMEELMHSKAAVLAVLGYLFARFD-ERFDGAPTLLIL 644
            + D + D   I D   A +  +EM+ ++ +   + A+  Y+F R D    +G P ++++
Sbjct: 692 NIFDNEGDNFSIED---ARIFGYEMKNVIKNDVVLGAMSMYIFHRIDIAMSEGRPFIVVV 748

Query: 645 DEAWLFLDDPVFAARIRQWLKTLRKKNVSVIFATQSLADI-KDSSIAPAVIESCASRIFL 703
           +E   ++ +P+  A ++  L T R++N  +IF T +   I KD  +    I    + I L
Sbjct: 749 EEGQRYISNPINLAWLKIMLTTYRRRNGMMIFVTPTPEVITKDDDL----IGQFKTSILL 804

Query: 704 PNPQATEPQIRTIYEGFGLNSRQIE---IVATAEPKRDYYYQSRLGNRLFDLDLG 755
           PN +A         +  GL   Q E   IV T    R +  ++   + +  LDLG
Sbjct: 805 PNDKANPATYMGNDQNSGLGCTQTEFEWIVNTPPYLRQFMIKNSHDSVISKLDLG 859