Pairwise Alignments

Query, 423 a.a., Conjugative transfer protein TrbI from Variovorax sp. SCN45

Subject, 377 a.a., component of type IV secretion system from Agrobacterium fabrum C58

 Score = 67.0 bits (162), Expect = 9e-16
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 5/196 (2%)

Query: 212 TETRNSGHLQMPGSPYQVVAGTVIAGALVTGIKSDLPRDVIATVTEPVYDTATGKFLLIP 271
           TE + +    +P   + V  GT+I   L T I + L   V   +   V  T T   +L+ 
Sbjct: 165 TELQPTRATLLPHPDFMVTEGTIIPCILQTAIDTSLAGYVKCVLPWDVRGT-TNNVVLLD 223

Query: 272 QGSRILGKYNSQVSFGQSRVQMVWNRIILPDASSLTLDNLVGTDPAGYVGLEDEVDRHWG 331
           +G+ ++G+    +  G +RV ++W+R   PD + ++L +    D  G  GL   VD H+ 
Sbjct: 224 RGTTVVGEIQRGLQQGDARVFVLWDRAETPDHAMISLAS-PSADELGRSGLPGTVDNHFW 282

Query: 332 RILAGAALTTLLGVGAELAAPENRQDGNRIVIATRDGLQDSVNQTGQEMTRRNMNVQPTL 391
           +  +GA L +++    + A+      G      + + +Q++  QT     +  +N+ PTL
Sbjct: 283 QRFSGAMLLSVVQGAFQAASTYAGSSGGG---TSFNSVQNNGEQTADTALKATINIPPTL 339

Query: 392 TARPGLPVRVIVNRDL 407
               G  V + V RDL
Sbjct: 340 KKNQGDTVSIFVARDL 355