Pairwise Alignments

Query, 439 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 440 a.a., L-arabinose transporter (from data) from Pseudomonas simiae WCS417

 Score =  372 bits (956), Expect = e-107
 Identities = 195/409 (47%), Positives = 264/409 (64%), Gaps = 6/409 (1%)

Query: 25  KVGWRLIPLLFLCYIVAYLDRVNVGFAKLQMQGDLQFSEAVYGLGAGIFFIGYFLFEVPS 84
           ++  +LIP L L Y++AY+DR  VGFAKL M  D+   +A YGLGAG+FFIGYFLFE+PS
Sbjct: 10  RITLKLIPFLILLYLIAYVDRSAVGFAKLHMGADVGIGDAAYGLGAGLFFIGYFLFEIPS 69

Query: 85  NVVMHRVGARRWIARIMITWGVLSAATMFVSSPMSFYVIRFLLGAAEAGFFPGIIMYLTY 144
           N+++ R GARRW ARIMITWG ++    FV  P SFYV+RFLLGAAEAGFFPG++ Y+T 
Sbjct: 70  NLMLDRFGARRWFARIMITWGAITIGMAFVQGPHSFYVMRFLLGAAEAGFFPGVLYYITQ 129

Query: 145 WYPAARRGKATSLFLAAIPFAGILGGPLSGWILQGMNGVHGWAGWQWLFLLQGLPTVALG 204
           W+P   RGK   LF+ + P A ++ GP+SG +L GM+G+ G  GWQWLF++ G P + L 
Sbjct: 130 WFPVRHRGKILGLFILSQPIAMMITGPVSGGLL-GMDGMLGLHGWQWLFIVIGTPAILLT 188

Query: 205 LVVWRYLDDRVKDVQWLTPAERELIARDIAREDAAKAQPR---ILGVLGNGRVWLLALVY 261
             V RYL D  K V W++  E+  +  ++A++  A  Q R    L  L + RV LLAL Y
Sbjct: 189 WPVLRYLPDGPKQVTWMSEDEKAWLTGELAKDLQAYGQTRHGNPLHALKDKRVLLLALFY 248

Query: 262 FAYTSGLYGISFWLPSIIKAIGVTGALDIGLLSAIPWTFGVIAMYFMARSADRRLEYRWH 321
              T  +YG+  WLP++IK  G +  L  G +SA+P+ FG+I +  + RS+DR  +   H
Sbjct: 249 LPVTLSIYGLGLWLPTLIKQFGGSD-LTTGFISAVPYIFGIIGLLIIPRSSDRLNDRYGH 307

Query: 322 SALAAVVGALGLVLSVIFHGNTTLAMAGLTLATMGIMSTFPVFWGMPTAFLGGAAAAAGI 381
            A+  V+GA+GL  S  +     L MA L LA   + S   VFW +P  F  GA+AAAGI
Sbjct: 308 LAVLYVLGAIGLFFSA-WLTVPLLQMAALCLAAFAMFSCTAVFWTLPGRFFAGASAAAGI 366

Query: 382 ALINSFGNLSGFSAPFLIGLIKDATRSTDAGLYMLAALLVTGAVLVLFV 430
           ALINS GNL G+  PF+IG +K+ T +  +GLY L+ ++V G VL   V
Sbjct: 367 ALINSVGNLGGYIGPFVIGALKEYTGNLASGLYFLSGVMVFGLVLTFVV 415