Pairwise Alignments

Query, 516 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  197 bits (500), Expect = 1e-54
 Identities = 157/526 (29%), Positives = 250/526 (47%), Gaps = 37/526 (7%)

Query: 4   VDYLDKGAQLGAHSPCLTLGDTDLSYAQVQRISWRVARGLRRAGVRPGDKVAVLSSNDAM 63
           + ++++ A +  + P +  G    ++ +  +   R+A  L   G+  GD VAV+  N   
Sbjct: 21  LSFIERTAAVYGNYPAVIHGAIRRNWQETYQRCRRLASALAGRGIGRGDTVAVMLPNTPT 80

Query: 64  AFATVFGISRAGCVWCPINPRNEASENAFVLDAFDCACLLFHGNYADMVDQMRTRLPKLR 123
                FG+   G V   +N R +A   AF+L   +   L+    +  +++     L    
Sbjct: 81  MLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHAVIEGALALLEHPP 140

Query: 124 ALVCLDARQLFAPSLDEWLEGLDDSPLDITP-------------PDD---VAMIAGTGGT 167
            +V +D          E+ EG   S LD                PDD      +  T GT
Sbjct: 141 LVVDVDD--------PEYGEGRAVSQLDYEALLNEGDPEFAWEWPDDEWQAISLNYTSGT 192

Query: 168 TGQPKGVMLSGRNLEAMSALTLMGYPFEGRPAYLALAPLTHAAGVLCLP--VMALGGRVV 225
           TG PKGV+   R     +    M +    RP YL   P+ H  G  C P  + AL G  V
Sbjct: 193 TGNPKGVVYHHRGAYLNALGNQMTWAMGHRPVYLWTLPMFHCNG-WCYPWTITALAGTHV 251

Query: 226 IMPKPDLGEFLGLIEARRITHTFLPPTLIYMLLQHPQLASTQLDS-LQCFWYGAAPMSAT 284
            + + D  + L LI   +++H    P ++  L+  P+ A   ++  +Q    GAAP +  
Sbjct: 252 FLRRVDPQKILTLIREHKVSHLCGAPIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPA-- 309

Query: 285 RLEEALQKIGPVMAQLFGQTEAPMMISMMSPREHFNADGTVARHRLSSAGRPGPLVQVGV 344
           ++  A++++G  +   +G TE    +++ +  + ++A     R R+ S          G+
Sbjct: 310 KVIGAVEQMGIKVTHTYGLTEVYGPVTVCAWHDEWDALSLEERARIKSRQGVRYPTLDGL 369

Query: 345 MNGDGALLPA----GEN-GEIVVRGSLVMQGYYKDARATEEARRFGWHHTGDIGYLDADG 399
           M  D   L      G+  GEI +RG+ VM+GY K+  AT EA R GW HTGD+    ADG
Sbjct: 370 MVADPQTLQPVPRDGDTLGEIFMRGNTVMKGYLKNPEATAEAFRGGWFHTGDLAVWHADG 429

Query: 400 YLYIVDRAKDMIISGGFNVYSAEVEQALMQHPDVQDSAVVGLPDEKWGERVVAVLQLQAG 459
           Y+ I DR KD+IISGG N+ + EVE AL +H  V ++AVV  PDEKWGE   A + L+ G
Sbjct: 430 YIEIKDRLKDIIISGGENISTIEVEDALYKHSAVLEAAVVARPDEKWGETPCAFVALKPG 489

Query: 460 RQVDPE-EIKAFVKSRIGSVKAPKQIEVWLDLPRSKVGKVLKKDVR 504
           R+   E +I ++ +  +   K PK + V+ +LP++  GK+ K  +R
Sbjct: 490 REDTREADITSWCREHLAGFKVPKTV-VFGELPKTSTGKIQKYVLR 534