Pairwise Alignments

Query, 516 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 548 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  204 bits (520), Expect = 5e-57
 Identities = 169/537 (31%), Positives = 245/537 (45%), Gaps = 46/537 (8%)

Query: 4   VDYLDKGAQLGAHSPCLTLGDTDLSYAQVQRISWRVARGLRRAGVRPGDKVAVLSSNDAM 63
           + +L + AQ+      +  G    SY Q+   S  +A  L R GV+PG++VA+L+ N   
Sbjct: 23  LSFLKRAAQVYPQRDAVIYGARRYSYRQLHERSRALASALERVGVQPGERVAILAPNIPE 82

Query: 64  AFATVFGISRAGCVWCPINPRNEASENAFVLDAFDCACLLFHGNYADMVDQMRTRLPKLR 123
                +G+  AG V   IN R E    AF+L       L+    +  + +Q    L    
Sbjct: 83  MLEAHYGVPGAGAVLVCINIRLEGRSIAFILRHCAAKVLICDREFGAVANQALAMLDAPP 142

Query: 124 ALVCLDARQLFAPSLDEWLE-------GLDDSPLDITPPDDVAMIA--GTGGTTGQPKGV 174
            LV +D  Q     L   L+       G    PL   P ++   IA   T GTTG PKGV
Sbjct: 143 LLVGIDDDQAERADLAHDLDYEAFLAQGDPARPLS-APQNEWQSIAINYTSGTTGDPKGV 201

Query: 175 MLSGRNLEAMSALTLMGYPFEGRPAYLALAPLTHAAGVLCLPVMAL-GGRVVIMPKPDLG 233
           +L  R     +    + +    R  YL   P+ H  G      + L GG  V + K    
Sbjct: 202 VLHHRGAYLNACAGALIFQLGPRSVYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRKVQPD 261

Query: 234 EFLGLIEARRITHTFLPPTLIYMLLQHPQLASTQLDSLQCFWYGAAPMSATRLEEALQKI 293
                I    +TH    P ++ ML+ H + AS     +     GAAP SA  +  A++  
Sbjct: 262 AINAAIAEHAVTHLSAAPVVMSMLI-HAEHASAPPVPVSVITGGAAPPSA--VIAAMEAR 318

Query: 294 GPVMAQLFGQTEA--PMMISMMSP---------REHFNADGTVARHRLSSA-------GR 335
           G  +   +G TE+  P  + +  P         R  F +   VA   L  A       GR
Sbjct: 319 GFNITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMSRQGVAHPLLEEATVLDTDTGR 378

Query: 336 PGPLVQVGVMNGDGALLPAGENGEIVVRGSLVMQGYYKDARATEEARRFGWHHTGDIGYL 395
           P P         DG  L     GE+VVRG+ VM+GY  +  AT  A   GW HTGD+  L
Sbjct: 379 PVP--------ADGLTL-----GELVVRGNTVMKGYLHNPEATRAALANGWLHTGDLAVL 425

Query: 396 DADGYLYIVDRAKDMIISGGFNVYSAEVEQALMQHPDVQDSAVVGLPDEKWGERVVAVLQ 455
             DGY+ I DRAKD+IISGG N+ S E+E+ L QHP+V ++AVV  PD +WGE   A + 
Sbjct: 426 HLDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWGETPHAFVT 485

Query: 456 LQAGRQVDPEEIKAFVKSRIGSVKAPKQIEVWLDLPRSKVGKVLKKDVRSTLLQRSA 512
           L+A      +++  + + R+   KAP+ + + +DLP++  GK+ K  +R    Q+ A
Sbjct: 486 LRADALASGDDLVRWCRERLAHFKAPRHVSL-VDLPKTATGKIQKFVLREWARQQEA 541