Pairwise Alignments

Query, 542 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 544 a.a., AMP-binding protein from Pseudomonas simiae WCS417

 Score =  218 bits (556), Expect = 4e-61
 Identities = 163/522 (31%), Positives = 246/522 (47%), Gaps = 21/522 (4%)

Query: 26  VALGDVIHRSARRFGERTALI--EGEHRLSYRALDAASNRFAHHLLDLGLEKGERVGMLC 83
           + +G    R+  +F +  AL+    + R ++R L    +  A   L LG++ G+R+G+  
Sbjct: 20  MTIGQAFDRTVAQFPDGEALVVRHQQRRYTWRQLAETVDLHARAFLALGMQTGDRLGIWA 79

Query: 84  NNSIQMVVAMLGIQKAGLVWVPINTALGVEAIGYILSHAEVRHVVIDTALHAKPELRELL 143
            N  +  ++ +   K G++ V IN A     + Y+L  +  + +V   +     +   +L
Sbjct: 80  PNCAEWCISQIASAKLGVILVNINPAYRSSELEYVLKQSGCQWLVCAGSFKTS-DYHAML 138

Query: 144 QATGVSPLLCVLDGDAPPPGIATVPQAIAQGPETLPDVAIDSADLAL-------IMYTSG 196
           QA        +    +PPPG     Q  A G   +P   + S   +L       I YTSG
Sbjct: 139 QALNPDLRGMISLDPSPPPGFLPWAQLAALGTG-IPLEQLHSRQTSLHFDQAVNIQYTSG 197

Query: 197 TTGRQKGVMHSHASVHSVLLSN-MVEWGSSPERADVWSSVLPLFHC-GQHTVLMSALAVG 254
           TTG  KG   SH   H++L +  MV         D     +PL+HC G     +  +  G
Sbjct: 198 TTGFPKGATLSH---HNILNNGYMVGESLGLTAQDRLVIPVPLYHCFGMVMGNLGCITHG 254

Query: 255 GALVVLR-GFDPGAVLAAIERHKITVMVGLPMMYGALLAHPQRAARDLSSLRLCVYAMAP 313
             ++    GFDP   L A+     T + G+P M+ A+L HPQ    DLSSLR  + A A 
Sbjct: 255 TTMIYPNDGFDPLLTLTAVAEEHATGLYGVPTMFIAMLDHPQLGGFDLSSLRTGIMAGAT 314

Query: 314 MSRTLLLRLLDEF-CPNFALVSGQTEMYPGATIFEAHEQRRRFGSYWGVGTLVNEVAVMG 372
               ++ R++ E       +  G TE  P +    A +   R  +  G      E  ++ 
Sbjct: 315 CPIEVMRRVISEMHMSEVQIAYGMTETSPVSLQTGADDDLERRVTTVGRTQPQLENKIID 374

Query: 373 DDGELLGTDQVGEIVFRGPNVMLGYYKDPEATAHA-QRFGWHHSGDLGRMDEDGQLIFLD 431
            DG  +   ++GE+  RG +VMLGY+ +P+AT  A    GW H+GDL  MD  G +    
Sbjct: 375 ADGNTVARGEIGELCTRGYSVMLGYWNNPDATREAIDDAGWMHTGDLASMDAHGYVCIAG 434

Query: 432 RLKDMVKSGGENVPSIKVEEVLLRHPGVMNAAVVGLPHEHWGEAITAFVTRRPDAPADFT 491
           R KDM+  GGENV   ++EE    HP V +  V+G+P E +GEAI A+V   P   A+  
Sbjct: 435 RNKDMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPDERYGEAIVAWVKFHPGHVAN-- 492

Query: 492 EAVLTAHCKEHLGGFEVPKQIIFLPALPMTSTGKIQKFELRK 533
           E  L   CK  +  F+ PK   F+   PMT TGKIQKF +R+
Sbjct: 493 ELELQTWCKGRIAHFKTPKHFKFVEEFPMTVTGKIQKFRMRE 534