Pairwise Alignments

Query, 542 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  206 bits (524), Expect = 2e-57
 Identities = 166/535 (31%), Positives = 242/535 (45%), Gaps = 35/535 (6%)

Query: 28  LGDVIHRSARRFGERTALIEGEH--RLSYRALDAASNRFAHHLLDLGLEKGERVGMLCNN 85
           +G     +  R  +  AL+      R S+R L      +A  L+ LG+  G+RVG+   N
Sbjct: 20  IGQAFDATVARCCDSEALVSRHQGLRYSWRQLAEQVEIYARALIALGVNTGDRVGIWSPN 79

Query: 86  SIQMVVAMLGIQKAGLVWVPINTALGVEAIGYILSHAEVRHVVIDTALHAK--------- 136
             Q  +  L   K G + V IN A  V  + Y+L  +  R +V   A             
Sbjct: 80  CAQWCILQLASAKVGAILVNINPAYRVGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQEL 139

Query: 137 -PELRELLQATGVSPLLCVLDG----DAPPPGIATVPQAIAQGPETLPDVAIDSADLAL- 190
            PEL         S  L  L G     A PP       A A+        A  +   +L 
Sbjct: 140 VPELASAAPGELASECLPELRGVISLAANPPAGFLPWHAFAERAGQTSVEACTARQQSLQ 199

Query: 191 ------IMYTSGTTGRQKGVMHSHASVHSVLLSN--MVEWGSSPERADVWSSVLPLFHC- 241
                 I YTSGTTG  KG   SH ++    L+N  MV         D     +PL+HC 
Sbjct: 200 FDQPVNIQYTSGTTGAPKGATLSHYNI----LNNGFMVGESLGLTARDRMVIPVPLYHCF 255

Query: 242 GQHTVLMSALAVGGALVVLR-GFDPGAVLAAIERHKITVMVGLPMMYGALLAHPQRAARD 300
           G     +  +  G  ++     FD    L A+   + T++ G+P M+ A+L HP RA  D
Sbjct: 256 GMVMANLGCITHGSTMIYPNDAFDAELTLRAVAEERATILYGVPTMFIAMLDHPSRAHMD 315

Query: 301 LSSLRLCVYAMAPMSRTLLLRLLDEF-CPNFALVSGQTEMYPGATIFEAHEQRRRFGSYW 359
           LS+LR  + A A     ++ R++D+       +  G TE  P +      +      +  
Sbjct: 316 LSTLRSGIMAGATCPIEVMRRVIDQMHMAEVQIAYGMTETSPVSLQTGPDDDLELRVTTV 375

Query: 360 GVGTLVNEVAVMGDDGELLGTDQVGEIVFRGPNVMLGYYKDPEATAHA-QRFGWHHSGDL 418
           G      E  ++  DG ++   ++GE+  RG +VMLGY+ +P+ATA A    GW HSGDL
Sbjct: 376 GRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGDL 435

Query: 419 GRMDEDGQLIFLDRLKDMVKSGGENVPSIKVEEVLLRHPGVMNAAVVGLPHEHWGEAITA 478
             MDE G +  + R KDM+  GGEN+   ++EE    HP V +A V+G+P   +GE I A
Sbjct: 436 AVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVA 495

Query: 479 FVTRRPDAPADFTEAVLTAHCKEHLGGFEVPKQIIFLPALPMTSTGKIQKFELRK 533
           ++   P   A   E  L   CK  +  F+VP+ I F+   PMT TGK+QKF +R+
Sbjct: 496 WIKLHPGHSATVEE--LQGWCKARIAHFKVPRYIRFVDEYPMTVTGKVQKFRMRE 548