Pairwise Alignments

Query, 542 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

 Score =  213 bits (541), Expect = 2e-59
 Identities = 169/536 (31%), Positives = 251/536 (46%), Gaps = 37/536 (6%)

Query: 28  LGDVIHRSARRFGERTALIEGEHRLSY--RALDAASNRFAHHLLDLGLEKGERVGMLCNN 85
           +GD    +  RF +R AL+     L Y  R L  A ++ A  L+ LG++ G+R+G+   N
Sbjct: 20  IGDAFDATVARFPDREALVVHHQALRYTWRQLADAVDQHARALMALGVQPGDRLGIWAPN 79

Query: 86  SIQMVVAMLGIQKAGLVWVPINTALGVEAIGYILSHAEVRHVVIDTAL-----HAKPE-L 139
             +  +      K G + V IN A     + Y L  +  R V+   A      HA  + L
Sbjct: 80  CAEWCITQFASAKVGAILVNINPAYRSSELDYALGQSGCRWVICADAFKTSDYHAMLQGL 139

Query: 140 RELLQATGVSPLLC---------VLDGDAPPPGIATVPQAIAQGPETLPDVAIDSADLAL 190
              L ++    L+C         V    +PPPG      A+    E +   A+ +    L
Sbjct: 140 LPGLASSQPGALICERFPELRGVVSLALSPPPGFLAW-HALQARAEVVSGEALAARQAQL 198

Query: 191 -------IMYTSGTTGRQKGVMHSHASVHSVLLSN--MVEWGSSPERADVWSSVLPLFHC 241
                  I YTSGTTG  KG   SH+++    L+N  MV         D     +PL+HC
Sbjct: 199 RCDDPINIQYTSGTTGFPKGATLSHSNI----LNNGYMVGESLGLTEHDRLVVPVPLYHC 254

Query: 242 -GQHTVLMSALAVGGALVVLR-GFDPGAVLAAIERHKITVMVGLPMMYGALLAHPQRAAR 299
            G     +  +  G AL+     FDP A L A+ + K T + G+P M+ A L HPQR   
Sbjct: 255 FGMVMANLGCMTHGSALIYPSDAFDPLATLRAVAQEKATALYGVPTMFIAELDHPQRGEF 314

Query: 300 DLSSLRLCVYAMAPMSRTLLLRLLDEF-CPNFALVSGQTEMYPGATIFEAHEQRRRFGSY 358
           DLSSLR  + A A     ++ R++ E       +  G TE  P +    A +   R  + 
Sbjct: 315 DLSSLRTGIMAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSPVSLQTGAADDLERRVTS 374

Query: 359 WGVGTLVNEVAVMGDDGELLGTDQVGEIVFRGPNVMLGYYKDPEATAHA-QRFGWHHSGD 417
            G      E  V+  +G  +   ++GE+  RG +VMLGY+ +P+ATA +    GW H+GD
Sbjct: 375 VGRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTGD 434

Query: 418 LGRMDEDGQLIFLDRLKDMVKSGGENVPSIKVEEVLLRHPGVMNAAVVGLPHEHWGEAIT 477
           L  MDE G +  + R KDM+  GGEN+   ++EE    HP V +  V+G+P   +GE I 
Sbjct: 435 LAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIV 494

Query: 478 AFVTRRPDAPADFTEAVLTAHCKEHLGGFEVPKQIIFLPALPMTSTGKIQKFELRK 533
           A+V   P      +E  L    +  +  F+VP+   F+   PMT TGK+QKF +R+
Sbjct: 495 AWVRLHPGHAV--SEVELREWARARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMRE 548