Pairwise Alignments

Query, 542 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 548 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  235 bits (599), Expect = 4e-66
 Identities = 181/519 (34%), Positives = 255/519 (49%), Gaps = 27/519 (5%)

Query: 32  IHRSARRFGERTALIEGEHRLSYRALDAASNRFAHHLLDLGLEKGERVGMLCNNSIQMVV 91
           + R+A+ + +R A+I G  R SYR L   S   A  L  +G++ GERV +L  N  +M+ 
Sbjct: 26  LKRAAQVYPQRDAVIYGARRYSYRQLHERSRALASALERVGVQPGERVAILAPNIPEMLE 85

Query: 92  AMLGIQKAGLVWVPINTALGVEAIGYILSHAEVRHVVIDTALHAKPELRELLQATGVSPL 151
           A  G+  AG V V IN  L   +I +IL H   + ++ D    A     + L      PL
Sbjct: 86  AHYGVPGAGAVLVCINIRLEGRSIAFILRHCAAKVLICDREFGAVAN--QALAMLDAPPL 143

Query: 152 LCVLDGD-APPPGIA---TVPQAIAQGPETLPDVAIDSADLAL-IMYTSGTTGRQKGVMH 206
           L  +D D A    +A        +AQG    P  A  +   ++ I YTSGTTG  KGV+ 
Sbjct: 144 LVGIDDDQAERADLAHDLDYEAFLAQGDPARPLSAPQNEWQSIAINYTSGTTGDPKGVVL 203

Query: 207 SHASVHSVLLSNMVEWGSSPERADVWSSVLPLFHCGQHTVLMSALAVGGALVVLRGFDPG 266
            H   +    +  + +   P    +W+  LP+FHC   +   +    GG  V LR   P 
Sbjct: 204 HHRGAYLNACAGALIFQLGPRSVYLWT--LPMFHCNGWSHTWAVTLSGGTHVCLRKVQPD 261

Query: 267 AVLAAIERHKITVMVGLPMMYGALLAHPQRAARDLSSLRLCVYAMAPMSRTLLLRLLDEF 326
           A+ AAI  H +T +   P++  ++L H + A+     + +     AP S  +       F
Sbjct: 262 AINAAIAEHAVTHLSAAPVVM-SMLIHAEHASAPPVPVSVITGGAAPPSAVIAAMEARGF 320

Query: 327 CPNFALVSGQTEMYPGATIFEAH--------EQRRRFGSYWGVG-TLVNEVAVMGDD-GE 376
             N     G TE Y  +T+            E R +F S  GV   L+ E  V+  D G 
Sbjct: 321 --NITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMSRQGVAHPLLEEATVLDTDTGR 378

Query: 377 LLGTD--QVGEIVFRGPNVMLGYYKDPEATAHAQRFGWHHSGDLGRMDEDGQLIFLDRLK 434
            +  D   +GE+V RG  VM GY  +PEAT  A   GW H+GDL  +  DG +   DR K
Sbjct: 379 PVPADGLTLGELVVRGNTVMKGYLHNPEATRAALANGWLHTGDLAVLHLDGYVEIKDRAK 438

Query: 435 DMVKSGGENVPSIKVEEVLLRHPGVMNAAVVGLPHEHWGEAITAFVTRRPDAPADFTEAV 494
           D++ SGGEN+ S+++EEVL +HP V+ AAVV  P   WGE   AFVT R DA A   +  
Sbjct: 439 DIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWGETPHAFVTLRADALASGDD-- 496

Query: 495 LTAHCKEHLGGFEVPKQIIFLPALPMTSTGKIQKFELRK 533
           L   C+E L  F+ P+  + L  LP T+TGKIQKF LR+
Sbjct: 497 LVRWCRERLAHFKAPRH-VSLVDLPKTATGKIQKFVLRE 534