Pairwise Alignments

Query, 542 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 570 a.a., long-chain-fatty-acid-CoA-ligase from Agrobacterium fabrum C58

 Score =  206 bits (525), Expect = 1e-57
 Identities = 169/554 (30%), Positives = 260/554 (46%), Gaps = 45/554 (8%)

Query: 14  PSSPRFHERISRVALGDVIHRSARRFGERTALIEGEHRLSYRALDAASNRFAHHLLDLGL 73
           P  P      +  +L D++ +S ++F +R A       L+YR LDA +   A  L   GL
Sbjct: 24  PGVPSEIPASANASLIDLLEKSCKQFADRKAFSSMGKSLTYRELDADTRAVAAWLQSRGL 83

Query: 74  EKGERVGMLCNNSIQMVVAMLGIQKAGLVWVPINTAL------------GVEAIGYILSH 121
           EKG+RV ++  N +Q  VA+ GI +AG+V V +N               G +A+  + + 
Sbjct: 84  EKGDRVAVMMPNILQNPVAVYGILRAGMVVVNVNPLYTPRELEHQLKDSGAKALFVLENF 143

Query: 122 AEV----------RHVVIDTALHAKPELRELLQATGVSPLLCVLDGDAPPPGIATVPQAI 171
           A V          RHVV+  A+     L+  +    V  +  ++   A P  I+      
Sbjct: 144 AHVAQQAVPKTAVRHVVV-AAMGDLLGLKGHIVNLVVRKVKKLVPAHAIPGSISFKAMLK 202

Query: 172 AQGPETLPDVAIDSADLALIMYTSGTTGRQKGVMHSHASVHSVLLSNMVE--------WG 223
                +L  V + + D+A + YT GTTG  KG + +HA+    LL+N  +        + 
Sbjct: 203 EGQGVSLKPVGLTAQDIAFLQYTGGTTGVSKGAVLTHAN----LLANKAQISLWLDAAFN 258

Query: 224 SSPERADVWSSV--LPLFHCGQHTV--LMSALAVGGALVVLRGFDPGAVLAAIERHKITV 279
              +R +V + +  LPL+H    TV  LM     G  L++    D    +  +  ++  +
Sbjct: 259 GRKDRPEVLNFICALPLYHIFALTVNSLMGIALGGHNLLIANPRDIPGFVKELSHYQPHI 318

Query: 280 MVGLPMMYGALLAHPQRAARDLSSLRLCVYAMAPMSRTLLLRLLDEFCPNFALVSGQTEM 339
             GL  ++ AL+ + +    DLSSL   +     + R +  R +           G +E 
Sbjct: 319 FPGLTTLFNALMNNEEFRKLDLSSLIFVLGGGMAVQRPVAERWVSVVGCPITEGYGLSET 378

Query: 340 YPGATIFEAHEQRRRFGSYWGVGTLVNEVAVMGDDGELLGTDQVGEIVFRGPNVMLGYYK 399
            P AT+         F    G+     E+ +  +DG  L T +VGEI  RGP VM GY++
Sbjct: 379 SPVATVNRL--DAAEFSGTIGLPISSTEIDIRDEDGNSLPTGEVGEICIRGPQVMAGYWQ 436

Query: 400 DPEATAHA-QRFGWHHSGDLGRMDEDGQLIFLDRLKDMVKSGGENVPSIKVEEVLLRHPG 458
            P+ TA A    G+  SGD+G MDE G    +DR KDM+   G NV   +VEEV   HPG
Sbjct: 437 RPDETAKAITADGFFRSGDMGFMDERGYTKIVDRKKDMILVSGFNVYPNEVEEVAASHPG 496

Query: 459 VMNAAVVGLPHEHWGEAITAFVTRRPDAPADFTEAVLTAHCKEHLGGFEVPKQIIFLPAL 518
           V+  A +G+P EH GE +  FV ++  +    TEA L A C ++L  ++ PK I F   L
Sbjct: 497 VLECAAIGVPDEHSGETVKLFVVKKDQS---LTEAELKAFCAKNLTNYKRPKIIEFRTDL 553

Query: 519 PMTSTGKIQKFELR 532
           P ++ GKI + ELR
Sbjct: 554 PKSNVGKILRRELR 567