Pairwise Alignments

Query, 319 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 298 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 18/279 (6%)

Query: 32  LGALWGASFLFMRIGAAEFGALPAAAVRVAIASLFLLPIALLRGQGPTIAKHWKASFAVG 91
           L  +WG+++L +RIG   +  L  A +R   A   +      RG        WKA+  +G
Sbjct: 18  LYVIWGSTYLVIRIGVEYWPPLLLAGIRFCTAGALMYGFLRWRGVPAPTWPQWKAAGMIG 77

Query: 92  VF-----NSGLPFALFCFALLSINSGLAAVLNATTPMFGALVAWAWFRERPAGSRIVGLV 146
           +      N G+  A      + ++SG+AA+  AT P+F  L  + W   R       G++
Sbjct: 78  LLLLTVGNGGVSVAEH----MGVSSGVAALAVATVPLFTLLCGYFW-GARNTRLEWAGVI 132

Query: 147 IGFAGVAMLASRSAGVHAGATGHAALWAVLACLGACLCYGISASATRRHLGGVPALTTAT 206
           +G  G+AML       + G+T  ++    +  L A   +   +  +R+      A+ +A 
Sbjct: 133 LGIIGIAML-------NMGSTLQSSPMGAVLLLVAAASWAFGSVWSRQLPLPQGAMASAA 185

Query: 207 GSQIGATLFLAIPAFMLWPTQ-MPSLRAWLALLALGIACTGIAYILFFRLIERAGPARAL 265
              +     L + A      Q +P L  WLAL  L +  + IA+  +  L++   PA A 
Sbjct: 186 EMLVAGVALLMVSALSGERLQAVPPLEGWLALAYLTVFGSIIAFNAYMYLLKHVRPAAAT 245

Query: 266 TVTFLVPVFALFYGAVFLDEHITQWMLICAAVIVCGVAL 304
           +  ++ P  A+  G VF+ E I     +   VI+  V L
Sbjct: 246 SYAYVNPAVAVLLGIVFVGETIGLEEALAMLVIISAVLL 284