Pairwise Alignments

Query, 319 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  136 bits (342), Expect = 7e-37
 Identities = 96/292 (32%), Positives = 140/292 (47%), Gaps = 7/292 (2%)

Query: 18  PASASAAWLVDLVLLGALWGASFLFMRIGAAEFGALPAAAVRVAIASLFLLPIALLRG-Q 76
           P +  A  L+ L LL  LW AS+ F++IG      L   A R  IA L LL +  LRG +
Sbjct: 3   PQNTIARELLFLALLSTLWAASYTFIKIGVETIPPLTFIAARTLIAGLLLLVVIRLRGLR 62

Query: 77  GPTIAKHWKASFAVGVFNSGLPFALFCFALLSINSGLAAVLNATTPMFGALVAWAWFR-E 135
            P     W+  F     NS LPF L  +A  SI++GLA +LNATTP+F  L+     R E
Sbjct: 63  LPRDPATWRLFFVQACINSVLPFTLIAWAEQSIDAGLAVILNATTPIFTFLLTALVIRHE 122

Query: 136 RPAGSRIVGLVIGFAGVAMLASRSAGVHAGATGHAALWAVLACLGACLCYGISASATRRH 195
             +G ++ G + G  GV ++     GV A      A+W+ LA L A   Y  +A  ++  
Sbjct: 123 TVSGRKLFGTIAGMTGVCLI----IGVEALGGAGEAIWSQLAVLTAAFSYACAAIFSKNF 178

Query: 196 LGGVPALTTATGSQIGATLFLAIPAFMLWP-TQMPSLRAWLALLALGIACTGIAYILFFR 254
            G  P +  A     GA L L +   +  P T  PS  +  AL+ L +  T +A++++FR
Sbjct: 179 KGLDPVMPAAGSLICGAVLLLPVSLIVDRPWTLSPSAASLTALVCLSVFSTALAFMIYFR 238

Query: 255 LIERAGPARALTVTFLVPVFALFYGAVFLDEHITQWMLICAAVIVCGVALST 306
           L++  G     +  +L     +  G VFL E  T  M +    ++ GV   T
Sbjct: 239 LMQTLGSVGTTSQAYLRVPVGVAIGMVFLGEVPTSAMWVGLVCVIAGVLAMT 290