Pairwise Alignments

Query, 517 a.a., Type I secretion outer membrane protein, TolC family from Variovorax sp. SCN45

Subject, 477 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

 Score =  202 bits (515), Expect = 2e-56
 Identities = 142/432 (32%), Positives = 217/432 (50%), Gaps = 25/432 (5%)

Query: 31  LNELYDAARSYDATYQGARAQYDANVARAAQAKAGILPAVGLTAGV----TRSDIEIDTL 86
           L  +Y  A   +A    ARA Y A      QA+AG+LP   L+AG     TR+ ++  ++
Sbjct: 32  LVSVYQEAVDNNADLAAARADYGARREVVPQARAGLLP--NLSAGAEMMNTRTKLDEPSI 89

Query: 87  TGTGRGTTTPRDFNTQNVGINATQPLYRPANWATYEQGKRQADIARAVFTIAEQDLIVRV 146
           T    G +               QP++R   W   +  +   + A    +  EQ+LI++ 
Sbjct: 90  TSNRSGNSW---------SATLAQPIFRADRWFQLQAAEAVNEQAALELSATEQNLILQT 140

Query: 147 SQAYFDVLASQDSLALVRAQKVAVAEQLASAKRNFEVGTSTITDSREAQARYDLVTAQEI 206
           +Q YF VL +QD+LA  +A++ A   QL  +   F+VG S  TD  ++QA YD   A  I
Sbjct: 141 AQNYFAVLRAQDNLAATKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTARANRI 200

Query: 207 AAENDLQVKKVVLDQLVGRPGSV--PVPLAVPVVLPTALPADINAWVAQADEVHPAIQQA 264
            AE  +Q     L  L  R  +    V  ++PV +PT  P D  AWV  A   +  +   
Sbjct: 201 IAERQVQDAFEALVTLTNREYTSIQGVVHSLPVQVPT--PNDAKAWVETAGRQNLNLLAT 258

Query: 265 RLGVDVAGLEVEKAKAGHKPTLDANLGYNVTRNPT--GTTTSAVGTRANA----TTVGVT 318
              V  A   + + KAGH PTLDA   Y    N +   T  S +G R +     T+VG+ 
Sbjct: 259 NYAVSAAEETLRQRKAGHAPTLDAVAKYQKGDNDSLGFTNPSQLGVRYSGDVEQTSVGLQ 318

Query: 319 FNLPLFAGFATENRIKETLALEDQSRSVLEGTRRNVAQATRSAYLGLVSGAGQVKALEAA 378
            N+P+++G  T ++++E      QS    E  RR V + TR+ +  + +   QV+A + +
Sbjct: 319 LNIPIYSGGLTSSQVREAYQRLSQSEQQRESLRRQVVENTRNLHRAVNTDVEQVQARKQS 378

Query: 379 ESSSQSALDANRLGYQVGVRINIDVLNSQSQLFQTKRDLAQARYNVLLGNLKLRQANGTL 438
             S+QSAL+A  +GYQVG R  +DVL++Q QL+ + RD   +RY+ +L NL L+QA GTL
Sbjct: 379 IISNQSALEATEIGYQVGTRNIVDVLDAQRQLYTSVRDYNNSRYDYILDNLSLKQAAGTL 438

Query: 439 TTDDMHAINATL 450
           +  D+  +   L
Sbjct: 439 SPQDLQDLKRYL 450