Pairwise Alignments

Query, 517 a.a., Type I secretion outer membrane protein, TolC family from Variovorax sp. SCN45

Subject, 452 a.a., putative Outer membrane efflux protein from Pseudomonas putida KT2440

 Score =  218 bits (554), Expect = 5e-61
 Identities = 134/429 (31%), Positives = 224/429 (52%), Gaps = 13/429 (3%)

Query: 22  LALPAQGQTLNELYDAARSYDATYQGARAQYDANVARAAQAKAGILPAVGLTAGVTRSDI 81
           +A+ A    L + +D  +     Y+ A  +  A     A  +AG+LP +  +A       
Sbjct: 23  VAVQASAMDLKQAWDLLQYQGPIYRAAVHEKQAGGENRAIGEAGLLPQINASA------- 75

Query: 82  EIDTLTGTGR--GTTTPRDFNTQNVGINATQPLYRPANWATYEQGKRQADIARAVFTIAE 139
             + + G+ R  G     D++++   +   QPL+     A Y QG+++AD + AVF    
Sbjct: 76  YFNQVNGSQRQNGQDNDLDYDSKGANVRLRQPLFNKQKMAEYRQGQQRADYSVAVFDAKS 135

Query: 140 QDLIVRVSQAYFDVLASQDSLALVRAQKVAVAEQLASAKRNFEVGTSTITDSREAQARYD 199
           QD  VR++ AYFDVL + +++ L +A+  A  EQLASAKR  E+G  TITD  E+ AR D
Sbjct: 136 QDAAVRLADAYFDVLLASETITLAKAKLSAFEEQLASAKRRMELGAGTITDVDESVARRD 195

Query: 200 LVTAQEIAAENDLQVKKVVLDQLVGRPGSVPVPLAVPVVLPTALPADINAWVAQADEVHP 259
           L  A  I A+++L   +  L++ +G        L      P  +P ++  W+ +A    P
Sbjct: 196 LAEADLIDAQDNLVNARRKLEEYIGETPQALTTLQAGFSTPPLMPGNLQEWLVKAQADSP 255

Query: 260 AIQQARLGVDVAGLEVEKAKAGHKPTLDANLGYNVTRNPTGTTTSAVGTRANATTVGVTF 319
            I   R    +A  EV +A++GH PTLD   GY      +  + S +  R + +++G+  
Sbjct: 256 LIHARRHSYALAEEEVNRARSGHYPTLDFVAGYTA---GSSQSISELNQRNHYSSIGLEL 312

Query: 320 NLPLFAGFATENRIKETLALEDQSRSVLEGTRRNVAQATRSAYLGLVSGAGQVKALEAAE 379
           N+PL++G +T    ++  A   ++   L+ TR+ V   T   Y G+ SGA +++ALE A 
Sbjct: 313 NIPLYSGGSTSALSRQASANSSKALDELDATRQEVISNTTREYRGVQSGALRIQALEKAV 372

Query: 380 SSSQSALDANRLGY-QVGVRINIDVLNSQSQLFQTKRDLAQARYNVLLGNLKLRQANGTL 438
           +S++ +L + R G+ + G   N DVLN++  L+  + DL +A+ N L+  L+L  + G+L
Sbjct: 373 ASNERSLTSTRKGFKEGGTSTNSDVLNAEELLYDARHDLFEAKLNYLMSRLRLASSVGSL 432

Query: 439 TTDDMHAIN 447
             DD+  IN
Sbjct: 433 GDDDIEQIN 441