Pairwise Alignments

Query, 517 a.a., Type I secretion outer membrane protein, TolC family from Variovorax sp. SCN45

Subject, 492 a.a., type I secretion outer membrane protein, TolC family from Enterobacter asburiae PDN3

 Score =  201 bits (511), Expect = 5e-56
 Identities = 142/479 (29%), Positives = 235/479 (49%), Gaps = 26/479 (5%)

Query: 6   RLSPLSAALAST-FAALLALPAQGQTLNELYDAARSYDATYQGARAQYDANVARAAQAKA 64
           +L P+   L+ T F+A+    +Q + L ++Y  AR  +   + + A  DA   +  +A++
Sbjct: 3   KLLPILIGLSLTGFSAM----SQAENLLQVYQQARLGNPDLRKSAADRDAAFEKINEARS 58

Query: 65  GILPAVGLTAGVTRSDIEIDTLTGTGRGTTTPRDFNTQNVGINATQPLYRPANWATYEQG 124
            +LP +GL A  T S+         G       + N  +  +  TQ L+  + W      
Sbjct: 59  PLLPQLGLGADYTYSN---------GFRDANGVNSNATSASLQLTQTLFDMSKWRALTLQ 109

Query: 125 KRQADIARAVFTIAEQDLIVRVSQAYFDVLASQDSLALVRAQKVAVAEQLASAKRNFEVG 184
           ++ A I    +   +Q LI+  + AYF+VL++ D+L+   AQK A+  QL    + F VG
Sbjct: 110 EKSAGIQDVTYQTDQQTLILNTATAYFNVLSAIDALSYTEAQKQAIYRQLDQTTQRFNVG 169

Query: 185 TSTITDSREAQARYDLVTAQEIAAENDLQVKKVVLDQLVGRPGSVPVPLAVPVVLPTALP 244
              ITD + A+++YD V A E+ A N+L      L Q+ G        L V     T  P
Sbjct: 170 LVAITDVQNARSQYDTVLANEVTARNNLDNALESLRQVTGNYYPELASLNVDS-FKTDKP 228

Query: 245 ADINAWVAQADEVHPAIQQARLGVDVAGLEVEKAKAGHKPTLDANLGYNV---TRNPTGT 301
             +NA + +A+  + ++ QARL  D+A  ++ +A+ GH PTL  +    V   T + + T
Sbjct: 229 QAVNALLKEAENRNLSLLQARLSQDLAREQIRQAQDGHLPTLSLSASTGVSDTTYSGSKT 288

Query: 302 TTSAVG-TRANATTVGVTFNLPLFAGFATENRIKETLALEDQSRSVLEGTRRNVAQATRS 360
            TS    +      VG++F+LPL+ G    +++K+       +   LE   RNV Q  RS
Sbjct: 289 NTSQYDDSNMGQNKVGLSFSLPLYQGGQVNSQVKQAQYNFVGASEQLESAHRNVVQTVRS 348

Query: 361 AYLGLVSGAGQVKALEAAESSSQSALDANRLGYQVGVRINIDVLNSQSQLFQTKRDLAQA 420
           ++  + +    + A + A  S+QS+LDA   GY VG R  +DVL++ + L+  K+ L+ A
Sbjct: 349 SFNNVNASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQQLSSA 408

Query: 421 RYNVLLGNLKLRQANGTLTTDDMHAINATLASNGSVPAVPAATAPDRTPQQQQTPVVPV 479
           RY  L+  L ++QA GTL   D+  +N+ L         P +T+PD    +    V  V
Sbjct: 409 RYQYLINQLNIKQALGTLNEQDLQMLNSALGK-------PVSTSPDSVAPENPEQVAAV 460



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 10/85 (11%)

Query: 106 INATQPLY---RPANWATYEQGKRQADIARAVFTIAEQDLIVRVSQAYFDVLASQDSLAL 162
           ++AT  LY   +  + A Y+    Q +I +A+ T+ EQDL +  S     V  S DS+A 
Sbjct: 392 LDATTTLYNAKQQLSSARYQYLINQLNIKQALGTLNEQDLQMLNSALGKPVSTSPDSVAP 451

Query: 163 VRAQKVAVAEQLASAKRNFEVGTST 187
              ++VA  +       NF   ++T
Sbjct: 452 ENPEQVAAVD-------NFNANSNT 469