Pairwise Alignments

Query, 762 a.a., Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) from Variovorax sp. SCN45

Subject, 755 a.a., putative Phytochrome family protein from Pseudomonas putida KT2440

 Score =  609 bits (1571), Expect = e-178
 Identities = 344/737 (46%), Positives = 449/737 (60%), Gaps = 26/737 (3%)

Query: 29  LSNCDLEPIRVPGSIQPHGRMLVLLPDSLALVAWSENWPDDQLAAALAAVRGLSLPPLAP 88
           +  C  EPI+VPGSIQPHG +LVL    L ++  SEN  +  L      + G     L  
Sbjct: 18  MERCAQEPIQVPGSIQPHGFLLVLDATDLRVLQASEN-VEHWLGLPARELIGCHFADLVH 76

Query: 89  GGS---------------PVSLGAMTLAQ-----VTFDAAAHRSNNHLIVEFEAASPSGG 128
            G                P  +G + L Q            H  +  LI EFE       
Sbjct: 77  EGFDLHAHLTRLPEDEVFPFHIGDVRLRQGAPISALLHMLVHCHDQVLIAEFEPPRLPAD 136

Query: 129 --NEAPIYSLGRVFLPRLQEAGTMTELCALAAREMKRLTGFGRCLVYRFDAAGHGEVLAE 186
              +   Y L R F+  LQ A ++ +L      ++KR+TGFGR   YRFDA G+G+VLAE
Sbjct: 137 LVGQGDYYPLVRSFVASLQVASSIEDLLQQTVLQLKRITGFGRVKAYRFDAEGNGQVLAE 196

Query: 187 EADAGYDSYSGHHFPASDIPRQARALYLVNHFRLIADANYRPVRLRATDAALTAADIDLS 246
             D GY SY+G  FPA+DIPRQAR LY VN  R+I DANY+P  L       T   +D+S
Sbjct: 197 VVDPGYPSYAGLCFPAADIPRQARELYRVNRIRVIEDANYQPSPLLPATNPRTGKPLDMS 256

Query: 247 QAQLRSVSPIHLEYMRNMGTLASMSVSIVIDGKLWGLISCHDHAPRFLDTGTRLACEHLG 306
            A LRSVSP+HL+YMRNMGTLASMS+SIV+DG+LWGLISCH   PR +D  TR ACE L 
Sbjct: 257 FAALRSVSPVHLQYMRNMGTLASMSLSIVVDGQLWGLISCHHQQPRPVDLRTRTACELLA 316

Query: 307 QLLSLQIQSKESNGEVAERLELRQLTLQIVSHLADSDATLQHLTAEVSLMLRVMRATGAA 366
            +LSLQI+S+ES+    + L LRQ  ++++S +AD D+    L     ++L    A GAA
Sbjct: 317 SVLSLQIESRESHASTRKLLTLRQHIVRMISSMADHDSVSDGLRDLPEVLLAFADAQGAA 376

Query: 367 VVLDDEAWCVGDVPARVHVQELAGWIAGLGVE-VYESNALAAHFAPAAQFQDVAAGVLAI 425
           V+  +    +G  P    V  L  W+     + V+ S+ L        +  + A GVLA+
Sbjct: 377 VISAERCDLIGQTPPEAQVTALVHWLGQRDEDKVFHSDNLRRDITELPELANHAGGVLAV 436

Query: 426 SISQVHRHLILWFRPEIVQTVRWAGDPQKPQMVVSGRMHPRLSFASWVEHIRGRSTPWSV 485
           +ISQ+H H +LWFRPE ++TV WAG P K Q+   G + PR SF  W E  RG S  W  
Sbjct: 437 AISQIHSHYLLWFRPEQIRTVNWAGQPTK-QVGPQGNLDPRHSFERWQEEQRGYSQAWDP 495

Query: 486 AEVGAAGELRQALIGIVLRRAEELAAVASELGRVNKELEAFSYTVSHDLRAPMRHIAGYV 545
             +    ELR A++GIVLR+AEELA +A EL R NKELEAFSY+VSHDLRAP+RHIAGY 
Sbjct: 496 LVIEGVIELRAAVLGIVLRKAEELAQLAGELRRSNKELEAFSYSVSHDLRAPLRHIAGYT 555

Query: 546 DLVAQTEGKQLSARAHRYLSHVKDAAAFAGQMVDALLDFSRMGRSALKQRQVDSASLVDG 605
           +L+ + EG+ LS R  R+L H+ +AA FAG +VD LL+FS+MGRSAL+   VD  +LV+ 
Sbjct: 556 ELLGEIEGQGLSERGKRFLQHIGEAAHFAGSLVDNLLNFSQMGRSALRLSDVDLNALVEA 615

Query: 606 LVRELTRLEPQRNIEWQVDADLPLLYADPLLLQVAVRNLLANAVKYSRTRSPSRIAVRAI 665
           +  EL      R I W + A LP +  DP  + +A+ NL+ANA+KY+R R+P+RI + A+
Sbjct: 616 IRSELAPDYEGRAIVWDI-APLPKVIGDPAFINMALHNLIANAIKYTRGRTPARIEISAV 674

Query: 666 HSDLGDGLEVQDNGVGFQMKYVDKLFGVFQRLHQAEDFEGTGIGLANVKRIVERHGGTVW 725
                  + ++DNGVGF M Y +KLFGVFQRLH+ EDFEGTGIGLA+V+RI+ERH G VW
Sbjct: 675 QHPEETEVCIRDNGVGFDMAYANKLFGVFQRLHRMEDFEGTGIGLASVRRIIERHDGRVW 734

Query: 726 AKGEIDAGASFGFILPR 742
           A G++D GASF F LPR
Sbjct: 735 ATGQVDQGASFHFTLPR 751