Pairwise Alignments

Query, 103 a.a., DNA-binding protein HU-beta from Variovorax sp. SCN45

Subject, 99 a.a., DNA-binding protein HU-alpha from Pseudomonas putida KT2440

 Score = 77.8 bits (190), Expect = 3e-20
 Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 1/100 (1%)

Query: 1   MNRAELVEILAAKNDLSKAAANAVLDTLIETVQTAVKKGDAVQLVGFGTFKSAKRAARTG 60
           M + EL  ++A K DL+K  AN VL+ +++++  A+ K D V LVGFGTF+   R ARTG
Sbjct: 1   MRKPELAAVIADKADLTKEKANQVLNAILDSITGALDK-DTVTLVGFGTFEKRHRGARTG 59

Query: 61  KNPSTGAAIKIPASTVPKFVAGAKFKAVVDPKAAKRKAEK 100
           KNP TG  +KI AS    F  G   +  V+  A   K  K
Sbjct: 60  KNPQTGEPVKIKASNTVAFKPGKNLRDSVNAPAKPAKKGK 99