Pairwise Alignments

Query, 425 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 431 a.a., TRAP transporter, DctM subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  285 bits (729), Expect = 2e-81
 Identities = 160/423 (37%), Positives = 248/423 (58%), Gaps = 5/423 (1%)

Query: 3   VVMVATMVLCFALSISVAVSIGLASILGIQVTNA---NMLISVKEMFNSINKFPLAAIPF 59
           +++V + +    L + VA S+G +S+L + VT A   +M    + M   +N F L AIPF
Sbjct: 7   IILVLSFITLMGLGVPVAWSLGFSSLLTLMVTVAAVPSMTTIAQRMGAGLNSFSLLAIPF 66

Query: 60  FILAGNLMETGGISRRLVEFAKSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAI 119
           FILAG +M  GGI+ RL+  AK++ G + GGL    V+  M+F A++GS+VA   A+G I
Sbjct: 67  FILAGEIMNKGGIANRLINLAKALTGKLPGGLLYVNVIAAMLFGAIAGSAVAAASALGGI 126

Query: 120 LIPALIKHGYPTSYAAALQATSAELGVIIPPSIPMILYGV-SAEVSIGELFIAGFGPGIL 178
           L   +   GYP     A+  TS+  G++IPPS  +I+Y + S  VSI  LF+AG+ PG+ 
Sbjct: 127 LGKRMEDEGYPKELGVAVNVTSSTTGLVIPPSNVLIVYSLASGGVSIAALFVAGYIPGLF 186

Query: 179 ISLALMLFVWVYCKWKGWGKNDGEGRMPFGRALWQAGWALLMPVIILGGIYGGVFTPTEA 238
           + L LML    + K K     +       G+  + A  +L + VI++GGI  GVFT TEA
Sbjct: 187 MGLLLMLTAAYFIKKKKLPAGEPTSFKELGKVFFSAAPSLTLLVIVIGGIVMGVFTATEA 246

Query: 239 SAVAVFYALVVGMVIYREIKLKDLYVILRKSVMSSAVIMFIIANAGLFAFLITRAGVPDA 298
           SA+AV Y L +    Y E+K +DL  IL KS  ++AV+  +IA +   +++++   +P +
Sbjct: 247 SAIAVLYCLGLSF-FYGELKPRDLPAILLKSSATTAVVAMLIATSMAMSWVMSSEDIPQS 305

Query: 299 IGHWLQQVLQSPAMFLLGVNAALFVIGMFIETSAAIIVLAPILAPVAVHFGIDPVHFGLI 358
           I   L  +  +  + L+ +N  L  +G+F++ + A+++  PI  PV    GIDPVHFG+I
Sbjct: 306 ISAVLLSLSDNKFVILIIINLILLFVGIFMDMTPAVLIFTPIFLPVVTELGIDPVHFGII 365

Query: 359 MVVNLALGMITPPFGVNLFAACTVARISLDRIVRHLVPFVLVIMACLMVITYVPWVSLAL 418
           MV+NL +G+ TPP G  LF    VA+ S+  +V+ L+PF + ++  L VIT  P ++L L
Sbjct: 366 MVLNLCIGLCTPPVGSVLFIGVGVAKTSISNVVKPLLPFFIAMIIGLAVITIWPQLTLWL 425

Query: 419 RDL 421
             L
Sbjct: 426 PSL 428