Pairwise Alignments

Query, 464 a.a., Putative diheme cytochrome c-553 from Variovorax sp. SCN45

Subject, 1187 a.a., nicotinate dehydrogenase subunit B (EC 1.17.2.1) (from data) from Pseudomonas putida KT2440

 Score =  303 bits (777), Expect = 2e-86
 Identities = 189/433 (43%), Positives = 243/433 (56%), Gaps = 38/433 (8%)

Query: 23   AVAQKAEAPPAAPAAAPVTTAAPAASSDPVLERGRYLARAGDCVSCHTAPGKPAFGGGLP 82
            A+   A A P     APVT     + S  +LERGR +A AGDC  CHT  G  A  GGL 
Sbjct: 776  ALGMLATALPWRAEIAPVTPPGVGSWSAAMLERGRQVAAAGDCAVCHTVSGGKANAGGLA 835

Query: 83   MKTPFGTIVSTNITPDPEAGIGAYTEAEFARALREGVAKDGHHLYPAMPYPSFARVNDED 142
            M TPFGT+ STNITPDPE GIG ++ A F RA+REG+++DG HLYPA PY SF  +ND D
Sbjct: 836  MDTPFGTLYSTNITPDPETGIGRWSFAAFERAMREGISRDGRHLYPAFPYTSFRNINDAD 895

Query: 143  MHALFTFFRNGVQPVAQKPPATDLPWPFSMRGLMIGWNWIYLDKGVYQPDTARSAEWNRG 202
            M AL+ +  +   PV Q+ PA  + +PF+ R LM GWN  +L +G YQPD  RSA+WNRG
Sbjct: 896  MQALYAYLMSQT-PVRQEAPANQMRFPFNQRPLMAGWNARFLQRGEYQPDPQRSAQWNRG 954

Query: 203  AYLVQGLGHCGDCHTPRSMLGGVKAASDGKGDVFLSGAVIDGWYAQPLRHTGRPTMAQWP 262
            AYLV GLGHC  CH+PR+++G  K      G  +L+G ++DGW A  L   G+ +   W 
Sbjct: 955  AYLVDGLGHCTACHSPRNLMGAEKG-----GSSYLAGGMVDGWEAPALNALGK-SSTPWS 1008

Query: 263  AQDIVQYLQTG-RTGHTAAFGAMVDVVQNSTQHLSTQDLQAVASYLQSLGAEGGAQNAPS 321
              ++  YL TG    H  A G M  VV +    L   D++A+A YL SL  E        
Sbjct: 1009 EDELFNYLSTGFSEKHGVAAGPMGPVV-SELATLPKSDVRAIAHYLSSLEGE-------- 1059

Query: 322  PTSLVA-AAPQHPTALALRNGTVEGNSGAMVYLNNCNACHRSDGTGADKTF---PALAGN 377
            P +L A AAPQ  T ++L N       G  V+   C  CH SDG G  K F   P++A N
Sbjct: 1060 PQALAANAAPQVDTHVSLSN-------GERVFKGACLGCH-SDGLG-PKLFGVSPSMAVN 1110

Query: 378  SVVNAKDPTSLIRLVLAGSAMPSTTQAPSPIAMPDFGWRLSDADVASVLSFARSSWGN-- 435
            S V++  P +L+R+VL G   P+T        MP F   LSD  VA + ++ R  +    
Sbjct: 1111 SNVHSDLPDNLLRVVLHGIPTPATRDLG---YMPGFKDSLSDRQVADLAAYLRHRFAADK 1167

Query: 436  ---QGEAVTAAQV 445
               QG A  AAQV
Sbjct: 1168 PAWQGLASKAAQV 1180